Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09000

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
1,695,223	-	modC	LU632_RS08990	0.56	+0.2
1,695,223	-	modC	LU632_RS08990	0.56	-1.7
1,695,223	-	modC	LU632_RS08990	0.56	-1.8
1,695,223	-	modC	LU632_RS08990	0.56	+0.0
1,695,228	+	modC	LU632_RS08990	0.57	-1.9
1,695,362	+	modC	LU632_RS08990	0.69	-0.5
1,695,397	+	modC	LU632_RS08990	0.73	-0.3
1,695,397	+	modC	LU632_RS08990	0.73	-0.3
1,695,397	+	modC	LU632_RS08990	0.73	+3.7
1,695,398	-	modC	LU632_RS08990	0.73	+1.8
1,695,511	+	modC	LU632_RS08990	0.83	+2.1
1,695,555	+	modC	LU632_RS08990	0.88	+0.7
1,695,579	+	modC	LU632_RS08990	0.90	-0.9
1,695,602	-				+0.1
1,695,662	-				+1.2
1,697,597	+				+0.5
1,697,610	-				+1.1
1,697,623	+		LU632_RS09005	0.10	-1.8
1,697,639	+		LU632_RS09005	0.12	-0.9
1,697,639	+		LU632_RS09005	0.12	-0.8
1,697,640	-		LU632_RS09005	0.12	-0.1
1,697,640	-		LU632_RS09005	0.12	-0.9
1,697,642	+		LU632_RS09005	0.12	+0.3
1,697,643	-		LU632_RS09005	0.12	-2.4
1,697,643	-		LU632_RS09005	0.12	+0.7
1,697,813	-		LU632_RS09005	0.28	-0.6
1,697,974	-		LU632_RS09005	0.44	+0.7
1,698,175	+		LU632_RS09005	0.63	-1.7
1,698,314	+		LU632_RS09005	0.76	-0.2
1,698,314	+		LU632_RS09005	0.76	+0.1
1,698,315	-		LU632_RS09005	0.77	-0.8
1,698,383	+		LU632_RS09005	0.83	+2.4
1,698,384	-		LU632_RS09005	0.83	-0.5