Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05435

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
1,048,868	+	trmB	LU632_RS05425	0.52	-2.6
1,048,874	+	trmB	LU632_RS05425	0.53	-2.1
1,048,874	+	trmB	LU632_RS05425	0.53	+4.3
1,048,875	-	trmB	LU632_RS05425	0.53	-0.1
1,048,875	-	trmB	LU632_RS05425	0.53	+0.2
1,048,967	-	trmB	LU632_RS05425	0.66	-0.2
1,049,051	+	trmB	LU632_RS05425	0.78	-0.7
1,049,051	+	trmB	LU632_RS05425	0.78	+0.3
1,049,051	+	trmB	LU632_RS05425	0.78	+0.3
1,049,052	-	trmB	LU632_RS05425	0.78	-1.3
1,049,052	-	trmB	LU632_RS05425	0.78	-1.3
1,049,052	-	trmB	LU632_RS05425	0.78	+1.3
1,049,052	-	trmB	LU632_RS05425	0.78	+1.7
1,049,052	-	trmB	LU632_RS05425	0.78	-0.7
1,049,073	-	trmB	LU632_RS05425	0.81	+2.3
1,049,109	+	trmB	LU632_RS05425	0.86	-0.9
1,049,109	+	trmB	LU632_RS05425	0.86	-0.8
1,049,110	-	trmB	LU632_RS05425	0.86	+0.3
1,049,110	-	trmB	LU632_RS05425	0.86	+1.3
1,049,110	-	trmB	LU632_RS05425	0.86	+1.3
1,049,110	-	trmB	LU632_RS05425	0.86	-0.9
1,049,113	+	trmB	LU632_RS05425	0.86	+0.5
1,049,535	-				+0.1
1,049,607	+				+0.9
1,049,607	+				+0.9
1,049,630	+				-0.6
1,049,662	+				-1.1
1,049,714	+		LU632_RS05435	0.16	-2.8
1,049,714	+		LU632_RS05435	0.16	-1.9
1,049,715	-		LU632_RS05435	0.16	+1.2
1,049,998	-		LU632_RS05435	0.55	+1.2
1,050,044	+		LU632_RS05435	0.61	+0.5
1,050,045	-		LU632_RS05435	0.62	+0.2
1,050,084	+		LU632_RS05435	0.67	-0.7
1,050,085	-		LU632_RS05435	0.67	+0.5
1,050,291	+				-0.4
1,050,291	+				-2.9
1,050,292	-				-1.5
1,050,292	-				+3.3
1,050,330	-				+0.9
1,050,330	-				+0.3
1,050,383	+				+0.1
1,050,413	-				+4.1