Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04685

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
917,744	+				+0.2
917,811	+		LU632_RS04685	0.24	+0.2
917,811	+		LU632_RS04685	0.24	-0.8
917,938	-		LU632_RS04685	0.58	+0.8
917,938	-		LU632_RS04685	0.58	-0.3
917,985	+		LU632_RS04685	0.71	-1.1
917,985	+		LU632_RS04685	0.71	+0.9
917,985	+		LU632_RS04685	0.71	+0.2
917,985	+		LU632_RS04685	0.71	-1.3
917,986	-		LU632_RS04685	0.72	-0.3
917,986	-		LU632_RS04685	0.72	+2.5
917,992	-		LU632_RS04685	0.73	-0.7
918,120	+				+1.4
918,207	+		LU632_RS04690	0.14	+0.9
918,231	+		LU632_RS04690	0.17	+0.1
918,353	+		LU632_RS04690	0.33	-1.9
918,354	-		LU632_RS04690	0.33	-0.4
918,508	+		LU632_RS04690	0.53	+1.5
918,508	+		LU632_RS04690	0.53	+0.0
918,508	+		LU632_RS04690	0.53	-1.1
918,508	+		LU632_RS04690	0.53	+1.6
918,509	-		LU632_RS04690	0.53	-1.9
918,509	-		LU632_RS04690	0.53	+0.5
918,640	-		LU632_RS04690	0.69	-1.0
918,889	+				+0.7
918,890	-				-1.1
918,890	-				-0.5
918,911	+				-1.6
918,931	+				-0.3
918,932	-				+0.2
918,932	-				-1.3
918,975	-				-1.8
918,975	-				-1.5
918,977	+				-1.3
919,039	+				-0.3
919,054	+				-2.1
919,073	-				-1.5