Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04580

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
897,378	+				+0.5
897,436	+				-1.1
897,436	+				-0.7
897,436	+				+1.2
897,436	+				+0.0
897,436	+				+1.5
897,437	-				+0.6
897,437	-				+1.1
897,437	-				-0.1
897,437	-				+1.0
897,449	+		LU632_RS04580	0.12	+0.0
897,583	-		LU632_RS04580	0.34	-0.8
897,583	-		LU632_RS04580	0.34	+2.2
897,586	-		LU632_RS04580	0.34	+0.2
897,747	-		LU632_RS04580	0.61	+1.6
897,747	-		LU632_RS04580	0.61	+1.6
897,747	-		LU632_RS04580	0.61	+1.7
897,759	+		LU632_RS04580	0.63	-0.1
897,762	-		LU632_RS04580	0.64	+0.2
897,762	-		LU632_RS04580	0.64	-1.7
897,762	-		LU632_RS04580	0.64	-2.4
897,842	+		LU632_RS04580	0.77	-1.1
897,842	+		LU632_RS04580	0.77	+2.6
897,843	-		LU632_RS04580	0.77	+0.3
897,843	-		LU632_RS04580	0.77	-1.8
898,021	+		LU632_RS04585	0.11	-1.4
898,022	-		LU632_RS04585	0.11	-1.2
898,025	+		LU632_RS04585	0.12	-1.6
898,025	+		LU632_RS04585	0.12	-0.8
898,025	+		LU632_RS04585	0.12	-1.2
898,025	+		LU632_RS04585	0.12	+0.5
898,025	+		LU632_RS04585	0.12	-2.2
898,026	-		LU632_RS04585	0.12	+0.2
898,026	-		LU632_RS04585	0.12	-0.2
898,029	+		LU632_RS04585	0.13	-0.9
898,029	+		LU632_RS04585	0.13	+0.1
898,030	-		LU632_RS04585	0.13	-0.5
898,045	-		LU632_RS04585	0.18	-1.4
898,062	-		LU632_RS04585	0.22	-0.1
898,084	+		LU632_RS04585	0.29	+0.7
898,119	-		LU632_RS04585	0.39	+0.1
898,311	-				+0.5