Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04255

Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
845,454	+				-3.3
845,563	+	yiaK	LU632_RS04250	0.16	-1.1
845,564	-	yiaK	LU632_RS04250	0.16	-3.1
845,699	-	yiaK	LU632_RS04250	0.29	-2.9
845,923	+	yiaK	LU632_RS04250	0.52	-4.0
846,021	-	yiaK	LU632_RS04250	0.61	-2.1
846,097	+	yiaK	LU632_RS04250	0.69	-2.4
846,130	+	yiaK	LU632_RS04250	0.72	-3.9
846,434	+				-1.9
846,489	+		LU632_RS04255	0.15	-0.4
846,490	-		LU632_RS04255	0.15	-1.8
846,636	+		LU632_RS04255	0.46	-1.5
846,636	+		LU632_RS04255	0.46	-0.4
846,821	+		LU632_RS04255	0.86	+0.2
846,821	+		LU632_RS04255	0.86	+0.2
846,901	+				-0.8
846,901	+				-0.5
846,902	-				-1.6
846,913	-				-2.1
846,985	+				+0.6
846,995	-				-3.3
847,002	-				-3.0
847,578	+		LU632_RS04260	0.52	-1.5
847,579	-		LU632_RS04260	0.52	-2.5
847,646	-		LU632_RS04260	0.57	-2.3
847,664	+		LU632_RS04260	0.59	+1.2
847,688	-		LU632_RS04260	0.61	-3.3