Experiment: Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tal and mog are separated by 111 nucleotides mog and LU632_RS02640 are separated by 226 nucleotides
LU632_RS02630: tal - transaldolase, at 525,952 to 526,905
tal
LU632_RS02635: mog - molybdopterin adenylyltransferase, at 527,017 to 527,601
mog
LU632_RS02640: LU632_RS02640 - MFS transporter, at 527,828 to 529,147
_RS02640
Position (kb) 527
528 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 526.030 kb on + strand at 526.032 kb on + strand at 526.048 kb on - strand, within tal at 526.064 kb on + strand, within tal at 526.210 kb on - strand, within tal at 526.210 kb on - strand, within tal at 526.259 kb on - strand, within tal at 526.307 kb on - strand, within tal at 526.473 kb on + strand, within tal at 526.586 kb on - strand, within tal at 526.588 kb on + strand, within tal at 526.757 kb on + strand, within tal at 526.758 kb on - strand, within tal at 526.758 kb on - strand, within tal at 526.907 kb on + strand at 526.911 kb on - strand at 526.937 kb on + strand at 526.937 kb on + strand at 526.938 kb on - strand at 526.958 kb on + strand at 526.963 kb on + strand at 526.968 kb on - strand at 526.969 kb on - strand at 527.027 kb on + strand at 527.028 kb on - strand at 527.033 kb on + strand at 527.034 kb on - strand at 527.075 kb on - strand at 527.470 kb on - strand, within mog at 527.502 kb on - strand, within mog at 527.502 kb on - strand, within mog at 527.502 kb on - strand, within mog at 527.538 kb on - strand, within mog at 527.595 kb on - strand at 527.615 kb on + strand at 527.616 kb on - strand at 527.621 kb on + strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.729 kb on + strand at 527.749 kb on - strand at 527.767 kb on + strand at 527.785 kb on + strand at 527.827 kb on + strand at 527.827 kb on + strand at 527.828 kb on - strand at 527.869 kb on + strand at 527.998 kb on - strand, within LU632_RS02640 at 527.998 kb on - strand, within LU632_RS02640 at 527.998 kb on - strand, within LU632_RS02640 at 528.026 kb on + strand, within LU632_RS02640 at 528.076 kb on + strand, within LU632_RS02640 at 528.108 kb on + strand, within LU632_RS02640 at 528.108 kb on + strand, within LU632_RS02640 at 528.202 kb on + strand, within LU632_RS02640 at 528.203 kb on - strand, within LU632_RS02640 at 528.281 kb on - strand, within LU632_RS02640 at 528.547 kb on + strand, within LU632_RS02640 at 528.568 kb on + strand, within LU632_RS02640
Per-strain Table
Position Strand Gene LocusTag Fraction Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) remove 526,030 + +0.1 526,032 + +0.4 526,048 - tal LU632_RS02630 0.10 +0.4 526,064 + tal LU632_RS02630 0.12 +0.7 526,210 - tal LU632_RS02630 0.27 -0.7 526,210 - tal LU632_RS02630 0.27 -2.2 526,259 - tal LU632_RS02630 0.32 -1.9 526,307 - tal LU632_RS02630 0.37 +0.7 526,473 + tal LU632_RS02630 0.55 +0.6 526,586 - tal LU632_RS02630 0.66 +0.6 526,588 + tal LU632_RS02630 0.67 -0.2 526,757 + tal LU632_RS02630 0.84 +1.7 526,758 - tal LU632_RS02630 0.84 -1.2 526,758 - tal LU632_RS02630 0.84 +0.6 526,907 + +1.4 526,911 - +0.1 526,937 + +0.4 526,937 + -1.5 526,938 - +0.2 526,958 + +0.4 526,963 + +1.5 526,968 - +0.4 526,969 - +0.7 527,027 + +1.4 527,028 - -3.2 527,033 + +1.4 527,034 - -2.2 527,075 - +0.3 527,470 - mog LU632_RS02635 0.77 +0.0 527,502 - mog LU632_RS02635 0.83 -0.2 527,502 - mog LU632_RS02635 0.83 +1.8 527,502 - mog LU632_RS02635 0.83 +0.0 527,538 - mog LU632_RS02635 0.89 +0.4 527,595 - -1.5 527,615 + +2.1 527,616 - -1.3 527,621 + -0.4 527,622 - +0.8 527,622 - +0.8 527,729 + +0.4 527,749 - +0.5 527,767 + -0.9 527,785 + -2.5 527,827 + -0.8 527,827 + +0.3 527,828 - +2.5 527,869 + +0.2 527,998 - LU632_RS02640 0.13 +0.5 527,998 - LU632_RS02640 0.13 +0.4 527,998 - LU632_RS02640 0.13 +1.2 528,026 + LU632_RS02640 0.15 +0.8 528,076 + LU632_RS02640 0.19 -0.2 528,108 + LU632_RS02640 0.21 -0.0 528,108 + LU632_RS02640 0.21 +1.8 528,202 + LU632_RS02640 0.28 +0.4 528,203 - LU632_RS02640 0.28 -0.0 528,281 - LU632_RS02640 0.34 +1.4 528,547 + LU632_RS02640 0.54 -0.9 528,568 + LU632_RS02640 0.56 +0.7
Or see this region's nucleotide sequence