Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS07930

Experiment: Arabinoxylan (Rye Flour) 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour) 2.5 mg/mL (C)
81,912	+		HMPREF1181_RS07925	0.21	-0.8
81,912	+		HMPREF1181_RS07925	0.21	+2.0
81,939	-		HMPREF1181_RS07925	0.23	+2.1
81,939	-		HMPREF1181_RS07925	0.23	+1.3
81,957	+		HMPREF1181_RS07925	0.25	+1.6
81,957	+		HMPREF1181_RS07925	0.25	-4.5
81,957	+		HMPREF1181_RS07925	0.25	-0.0
81,957	+		HMPREF1181_RS07925	0.25	-1.1
81,958	-		HMPREF1181_RS07925	0.25	+0.4
81,958	-		HMPREF1181_RS07925	0.25	-2.4
81,962	-		HMPREF1181_RS07925	0.25	+1.9
81,962	-		HMPREF1181_RS07925	0.25	+0.4
82,010	+		HMPREF1181_RS07925	0.29	-0.6
82,010	+		HMPREF1181_RS07925	0.29	-0.2
82,016	+		HMPREF1181_RS07925	0.30	-1.9
82,038	+		HMPREF1181_RS07925	0.32	-3.7
82,039	-		HMPREF1181_RS07925	0.32	-0.7
82,092	+		HMPREF1181_RS07925	0.36	-2.0
82,092	+		HMPREF1181_RS07925	0.36	+0.2
82,092	+		HMPREF1181_RS07925	0.36	-0.1
82,326	-		HMPREF1181_RS07925	0.56	+1.7
82,365	+		HMPREF1181_RS07925	0.60	-1.0
82,386	+		HMPREF1181_RS07925	0.61	-4.1
82,522	+		HMPREF1181_RS07925	0.73	-0.8
82,522	+		HMPREF1181_RS07925	0.73	-0.3
82,596	-		HMPREF1181_RS07925	0.79	+1.9
82,624	+		HMPREF1181_RS07925	0.82	+2.4
82,634	-		HMPREF1181_RS07925	0.83	-2.0
82,634	-		HMPREF1181_RS07925	0.83	-5.9
82,699	-		HMPREF1181_RS07925	0.88	+1.9
82,700	+		HMPREF1181_RS07925	0.88	-0.9
82,700	+		HMPREF1181_RS07925	0.88	-1.5
82,700	+		HMPREF1181_RS07925	0.88	-0.7
82,701	-		HMPREF1181_RS07925	0.88	-0.0
82,712	+		HMPREF1181_RS07925	0.89	+0.1
82,726	-				+1.8
82,729	+				-0.8
82,742	+				-2.2
82,756	+				+0.9
82,757	-				+1.5
82,797	-				+0.5
82,844	-				+1.9
82,847	+				-4.9
82,894	-				+1.5
82,908	+				-1.6
82,976	-		HMPREF1181_RS07930	0.25	+1.7
82,999	-		HMPREF1181_RS07930	0.32	-0.9
83,026	+		HMPREF1181_RS07930	0.40	-4.2
83,061	-		HMPREF1181_RS07930	0.51	+1.1
83,125	+		HMPREF1181_RS07930	0.70	-0.9
83,125	+		HMPREF1181_RS07930	0.70	-2.5
83,125	+		HMPREF1181_RS07930	0.70	-0.6
83,189	-				+2.1
83,268	+				-1.9
83,269	-				-4.3
83,311	+		HMPREF1181_RS07935	0.15	-1.8
83,370	+		HMPREF1181_RS07935	0.25	+1.7
83,370	+		HMPREF1181_RS07935	0.25	-2.5
83,371	-		HMPREF1181_RS07935	0.25	+0.5
83,411	-		HMPREF1181_RS07935	0.32	-1.5
83,413	+		HMPREF1181_RS07935	0.32	-1.5
83,486	-		HMPREF1181_RS07935	0.44	-0.4
83,568	+		HMPREF1181_RS07935	0.58	-1.8
83,700	-		HMPREF1181_RS07935	0.80	+1.1
83,700	-		HMPREF1181_RS07935	0.80	+0.7
83,758	+		HMPREF1181_RS07935	0.90	+2.0
83,785	-				-0.8
83,796	-				+1.5
83,832	-				-0.5
83,839	+				+0.2
83,840	-				+0.1
84,087	-		HMPREF1181_RS07940	0.37	+2.0
84,150	-		HMPREF1181_RS07940	0.46	-4.1
84,219	+		HMPREF1181_RS07940	0.56	-0.2
84,219	+		HMPREF1181_RS07940	0.56	+0.2
84,220	-		HMPREF1181_RS07940	0.56	-1.5
84,220	-		HMPREF1181_RS07940	0.56	+2.1
84,220	-		HMPREF1181_RS07940	0.56	-5.0