Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5769

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,796,316	+		GFF5768	0.22	-0.4
2,796,316	+		GFF5768	0.22	-1.7
2,796,317	-		GFF5768	0.22	-0.8
2,796,889	+		GFF5768	0.69	-0.5
2,796,890	-		GFF5768	0.69	+0.0
2,797,335	+				+0.5
2,797,335	+				+0.1
2,797,335	+				+0.8
2,797,336	-				+0.2
2,797,336	-				-0.2
2,797,389	+		GFF5769	0.11	-0.2
2,797,389	+		GFF5769	0.11	-0.2
2,797,389	+		GFF5769	0.11	+0.1
2,797,390	-		GFF5769	0.11	+0.1
2,797,390	-		GFF5769	0.11	+1.1
2,797,461	+		GFF5769	0.18	+0.6
2,797,519	-		GFF5769	0.23	+0.0
2,797,738	+		GFF5769	0.44	+1.3
2,797,738	+		GFF5769	0.44	+0.8
2,797,739	-		GFF5769	0.44	+0.2
2,797,923	+		GFF5769	0.61	-0.6
2,797,923	+		GFF5769	0.61	-0.4
2,797,923	+		GFF5769	0.61	-0.1
2,797,923	+		GFF5769	0.61	+0.5
2,797,924	-		GFF5769	0.61	+0.1
2,797,924	-		GFF5769	0.61	-0.5
2,797,924	-		GFF5769	0.61	+0.8
2,798,037	+		GFF5769	0.72	+0.6
2,798,037	+		GFF5769	0.72	+0.2
2,798,037	+		GFF5769	0.72	+0.5
2,798,091	+		GFF5769	0.77	-0.8
2,798,092	-		GFF5769	0.77	-0.8
2,798,094	+		GFF5769	0.77	-0.3
2,798,094	+		GFF5769	0.77	+0.5
2,798,095	-		GFF5769	0.77	+0.5
2,798,095	-		GFF5769	0.77	-2.5
2,798,095	-		GFF5769	0.77	+0.6
2,798,095	-		GFF5769	0.77	-0.8
2,798,095	-		GFF5769	0.77	+0.3
2,798,298	+				+0.3
2,798,298	+				-0.3
2,798,298	+				+1.1
2,798,299	-				+0.1
2,798,302	-				-0.4
2,798,302	-				+0.2
2,798,558	+		GFF5770	0.23	+0.1
2,798,558	+		GFF5770	0.23	+0.3
2,798,559	-		GFF5770	0.23	-0.5
2,798,559	-		GFF5770	0.23	+0.5
2,798,609	+		GFF5770	0.29	+0.0
2,798,610	-		GFF5770	0.29	+0.1
2,798,681	+		GFF5770	0.37	-0.3
2,798,682	-		GFF5770	0.37	+0.4
2,798,780	+		GFF5770	0.48	-0.6
2,798,781	-		GFF5770	0.48	+0.8
2,798,834	+		GFF5770	0.54	+0.2
2,798,835	-		GFF5770	0.54	-0.7
2,798,843	+		GFF5770	0.55	-0.1
2,798,843	+		GFF5770	0.55	-0.0
2,798,844	-		GFF5770	0.55	+0.1
2,798,844	-		GFF5770	0.55	-0.0
2,798,849	+		GFF5770	0.56	+0.1
2,798,850	-		GFF5770	0.56	+0.0
2,798,850	-		GFF5770	0.56	+0.6
2,798,850	-		GFF5770	0.56	-0.1
2,798,850	-		GFF5770	0.56	+0.1
2,798,969	+		GFF5770	0.69	-0.2
2,798,970	-		GFF5770	0.69	-0.5
2,799,057	-		GFF5770	0.79	+0.0
2,799,057	-		GFF5770	0.79	+0.8
2,799,083	+		GFF5770	0.82	-0.2
2,799,228	-				-0.3
2,799,228	-				-0.4
2,799,236	+				-0.4
2,799,236	+				+0.3
2,799,236	+				+0.7
2,799,236	+				-2.0
2,799,237	-				-0.5