Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5653

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,675,484	+		GFF5652	0.25	-0.1
2,675,658	+		GFF5652	0.38	+1.0
2,675,659	-		GFF5652	0.38	-0.3
2,675,659	-		GFF5652	0.38	-0.3
2,675,659	-		GFF5652	0.38	+0.8
2,675,659	-		GFF5652	0.38	-0.2
2,675,757	+		GFF5652	0.46	+0.3
2,675,901	+		GFF5652	0.57	-0.9
2,675,902	-		GFF5652	0.57	-0.6
2,676,014	-		GFF5652	0.66	-0.3
2,676,786	-		GFF5653	0.64	+0.2
2,676,977	+				-0.5
2,677,301	+		GFF5654	0.31	-1.1
2,677,301	+		GFF5654	0.31	-0.2
2,677,301	+		GFF5654	0.31	+0.1
2,677,416	-		GFF5654	0.43	-0.1
2,677,571	+		GFF5654	0.57	-0.6
2,677,607	+		GFF5654	0.61	-0.4
2,677,608	-		GFF5654	0.61	+0.1
2,677,652	+		GFF5654	0.65	-0.2
2,677,653	-		GFF5654	0.65	+1.2
2,677,653	-		GFF5654	0.65	+0.0
2,677,653	-		GFF5654	0.65	+0.9
2,677,653	-		GFF5654	0.65	+1.1
2,677,910	+				-0.8