Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5617

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,634,141	-		GFF5616	0.47	-0.8
2,634,221	+		GFF5616	0.54	-1.1
2,634,221	+		GFF5616	0.54	-0.6
2,634,222	-		GFF5616	0.54	-0.0
2,634,222	-		GFF5616	0.54	+0.0
2,634,350	+		GFF5616	0.65	+0.1
2,634,350	+		GFF5616	0.65	-0.4
2,634,351	-		GFF5616	0.65	+0.1
2,634,351	-		GFF5616	0.65	-0.2
2,634,416	+		GFF5616	0.70	-0.1
2,634,882	-				-0.6
2,635,010	+		GFF5617	0.20	-0.3
2,635,011	-		GFF5617	0.20	+0.1
2,635,208	+		GFF5617	0.37	+0.6
2,635,209	-		GFF5617	0.37	-0.2
2,635,212	-		GFF5617	0.38	+1.4
2,635,415	+		GFF5617	0.55	+0.3
2,635,415	+		GFF5617	0.55	+0.1
2,635,416	-		GFF5617	0.55	-0.1
2,635,584	-		GFF5617	0.70	+0.1
2,635,674	-		GFF5617	0.77	+0.4
2,635,860	+				-0.2
2,635,860	-				-0.8
2,635,922	+				+0.7
2,635,923	-				-0.9
2,636,088	-				+1.5
2,636,148	-		GFF5618	0.14	+1.2
2,636,207	+		GFF5618	0.24	-1.1
2,636,213	+		GFF5618	0.25	+1.2
2,636,214	-		GFF5618	0.26	-0.3
2,636,345	+		GFF5618	0.48	+0.2
2,636,346	-		GFF5618	0.48	+0.7
2,636,346	-		GFF5618	0.48	-0.3
2,636,561	+		GFF5618	0.84	-0.4
2,636,652	-				-0.1
2,636,892	+		GFF5619	0.19	-1.5
2,636,899	-		GFF5619	0.20	+0.4
2,636,928	+		GFF5619	0.23	+0.5