Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5402

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,407,054	-				+0.6
2,407,054	-				-0.2
2,407,427	+		GFF5401	0.36	-0.8
2,407,427	+		GFF5401	0.36	+0.2
2,408,293	+		GFF5402	0.22	+0.7
2,408,646	+		GFF5402	0.53	+0.6
2,408,743	+		GFF5402	0.62	-0.0
2,408,744	-		GFF5402	0.62	+1.2
2,409,108	-				+0.5
2,409,250	+		GFF5403	0.86	+0.4
2,409,250	+		GFF5403	0.86	-0.4
2,409,250	+		GFF5403	0.86	+0.1
2,409,250	+		GFF5403	0.86	+0.1
2,409,251	-		GFF5403	0.87	-0.4
2,409,251	-		GFF5403	0.87	+0.3
2,409,251	-		GFF5403	0.87	+1.3