Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5202

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,217,649	+		GFF5200	0.56	+1.2
2,217,649	+		GFF5200	0.56	-0.1
2,217,650	-		GFF5200	0.56	+0.3
2,217,650	-		GFF5200	0.56	+0.2
2,218,064	-				+0.7
2,218,064	-				+0.4
2,218,086	+				-1.0
2,218,201	+		GFF5201	0.18	-1.1
2,218,567	+				+0.3
2,218,568	-				+0.3
2,218,568	-				+0.3
2,218,568	-				-0.3
2,218,748	+		GFF5202	0.29	-0.7
2,218,922	+		GFF5202	0.57	-1.0
2,218,923	-		GFF5202	0.57	-0.4
2,219,141	+				+0.2
2,219,142	-				-0.1
2,219,142	-				+0.2
2,219,215	+				+0.2
2,219,215	+				+0.7
2,219,216	-				+0.1
2,219,431	+		GFF5203	0.49	+0.4
2,219,432	-		GFF5203	0.49	+0.3
2,219,432	-		GFF5203	0.49	+0.7
2,219,432	-		GFF5203	0.49	-0.2
2,219,432	-		GFF5203	0.49	-0.5
2,219,432	-		GFF5203	0.49	-0.6
2,219,464	+		GFF5203	0.60	-0.1
2,219,465	-		GFF5203	0.60	-0.2
2,219,465	-		GFF5203	0.60	-0.3
2,219,497	+		GFF5203	0.71	-0.5
2,219,497	+		GFF5203	0.71	-0.2
2,219,498	-		GFF5203	0.71	+0.3
2,219,554	+		GFF5203	0.89	-0.1
2,219,584	+				-0.4
2,219,648	+				+0.2
2,219,648	+				+0.1
2,219,648	+				-0.1
2,219,961	-		GFF5204	0.30	-0.6
2,219,961	-		GFF5204	0.30	+0.3
2,219,993	+		GFF5204	0.32	+0.3
2,219,993	+		GFF5204	0.32	+0.6
2,219,993	+		GFF5204	0.32	+0.0
2,219,994	-		GFF5204	0.33	+0.8
2,220,110	+		GFF5204	0.42	-0.1
2,220,110	+		GFF5204	0.42	+0.6