Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5156

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
2,168,967	+		GFF5154	0.55	+0.4
2,168,968	-		GFF5154	0.55	-0.2
2,169,022	+		GFF5154	0.65	+0.2
2,169,023	-		GFF5154	0.65	+0.5
2,169,023	-		GFF5154	0.65	+0.7
2,169,023	-		GFF5154	0.65	+0.4
2,169,023	-		GFF5154	0.65	-1.9
2,169,403	+		GFF5155	0.27	+0.5
2,169,403	+		GFF5155	0.27	+0.2
2,169,403	+		GFF5155	0.27	+0.4
2,169,403	+		GFF5155	0.27	+0.8
2,169,403	+		GFF5155	0.27	+0.3
2,169,404	-		GFF5155	0.27	+0.4
2,169,404	-		GFF5155	0.27	+0.1
2,169,618	+		GFF5155	0.80	-0.2
2,169,618	+		GFF5155	0.80	-0.0
2,169,619	-		GFF5155	0.81	+0.3
2,170,078	-		GFF5156	0.31	+0.6
2,170,200	-		GFF5156	0.43	+0.3
2,170,324	-		GFF5156	0.55	+0.7
2,170,446	+		GFF5156	0.67	-0.0
2,170,446	+		GFF5156	0.67	+0.2
2,170,446	+		GFF5156	0.67	+0.3
2,170,447	-		GFF5156	0.67	+0.7
2,170,447	-		GFF5156	0.67	+0.6
2,170,447	-		GFF5156	0.67	+1.2
2,170,447	-		GFF5156	0.67	+0.5
2,170,483	-		GFF5156	0.70	+0.6
2,170,572	+		GFF5156	0.79	-0.0
2,170,573	-		GFF5156	0.79	+0.8
2,170,933	+		GFF5157	0.19	+0.2
2,170,933	+		GFF5157	0.19	+0.5
2,170,934	-		GFF5157	0.19	+1.4
2,170,939	+		GFF5157	0.20	+1.3
2,170,939	+		GFF5157	0.20	+1.1
2,170,939	+		GFF5157	0.20	+1.1
2,170,939	+		GFF5157	0.20	+0.4
2,170,939	+		GFF5157	0.20	+1.5
2,170,940	-		GFF5157	0.21	+0.6
2,170,940	-		GFF5157	0.21	+0.7
2,171,166	+		GFF5157	0.66	+0.3
2,171,167	-		GFF5157	0.66	+0.5
2,171,167	-		GFF5157	0.66	+0.3
2,171,188	+		GFF5157	0.70	+0.8
2,171,188	+		GFF5157	0.70	-0.2
2,171,188	+		GFF5157	0.70	+0.4
2,171,188	+		GFF5157	0.70	+2.1
2,171,320	+				+0.3
2,171,320	+				+0.3
2,171,320	+				+0.2
2,171,321	-				+0.7
2,171,321	-				-0.2
2,171,321	-				+0.1
2,171,321	-				+0.4
2,171,361	+				-0.1
2,171,362	-				+0.6
2,171,362	-				+0.6
2,171,389	+				-0.5
2,171,389	+				+0.1
2,171,390	-				+0.4
2,171,390	-				-1.5
2,171,390	-				+0.1
2,171,546	-				-0.1
2,171,546	-				+0.4
2,171,546	-				-0.6
2,171,603	-				-0.6
2,171,603	-				+0.4
2,171,716	+				+0.8
2,171,717	-				+0.5
2,171,717	-				+1.7
2,171,717	-				+1.3
2,171,717	-				+0.4
2,171,755	+				+0.6
2,171,756	-				+1.3
2,171,756	-				+1.2