Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF354

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
15,875	-		GFF352	0.75	+0.4
16,236	+				+0.1
16,236	+				-1.9
16,236	+				-1.7
16,236	+				-0.9
16,236	+				-0.1
16,285	-		GFF353	0.12	+0.1
16,635	+				-0.3
16,946	+		GFF354	0.54	-0.3
16,946	+		GFF354	0.54	+0.3
16,946	+		GFF354	0.54	+0.3
16,947	-		GFF354	0.54	-0.9
16,947	-		GFF354	0.54	-1.5
17,013	-		GFF354	0.69	-0.2
17,021	+		GFF354	0.71	-0.6
17,021	+		GFF354	0.71	-0.3
17,054	+		GFF354	0.78	-0.9
17,054	+		GFF354	0.78	+0.1
17,054	+		GFF354	0.78	+0.2
17,054	+		GFF354	0.78	-0.5
17,055	-		GFF354	0.78	+0.9
17,055	-		GFF354	0.78	-0.7
17,085	-		GFF354	0.85	+1.5
17,164	+				+0.3
17,165	-				-1.4
17,424	+				-2.7
17,425	-				+0.4
17,760	+		GFF355	0.14	-0.2
17,835	+		GFF355	0.21	+0.3
17,836	-		GFF355	0.21	-0.5
17,836	-		GFF355	0.21	+1.9
17,836	-		GFF355	0.21	-0.3