Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3046

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
125,871	+				+0.2
126,560	+		GFF3045	0.70	-0.6
126,812	+				+0.1
126,812	+				-0.4
126,812	+				-0.3
126,813	-				-0.8
127,093	+		GFF3046	0.42	+0.4
127,503	+		GFF3047	0.14	-0.1
127,639	-		GFF3047	0.44	+0.0
127,671	+		GFF3047	0.51	+0.1
127,672	-		GFF3047	0.51	+0.5
127,827	+		GFF3047	0.86	-0.1
127,827	+		GFF3047	0.86	-2.5
127,827	+		GFF3047	0.86	-0.0
127,828	-		GFF3047	0.86	-0.4