Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2209

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
1,097,464	-		GFF2208	0.47	+0.2
1,097,472	+		GFF2208	0.48	-2.1
1,097,473	-		GFF2208	0.48	-0.3
1,097,914	-		GFF2208	0.78	+0.8
1,098,072	+		GFF2208	0.89	+1.3
1,098,072	+		GFF2208	0.89	-0.2
1,098,072	+		GFF2208	0.89	+0.3
1,098,073	-		GFF2208	0.89	+0.1
1,098,073	-		GFF2208	0.89	+0.0
1,098,126	+				+0.0
1,098,462	-		GFF2209	0.23	+1.5
1,098,603	-		GFF2209	0.37	+1.1
1,098,645	-		GFF2209	0.41	-0.7
1,098,905	-		GFF2209	0.67	-0.4
1,099,358	+				+1.2
1,099,707	+		GFF2210	0.32	-0.1
1,099,707	+		GFF2210	0.32	+0.6
1,099,708	-		GFF2210	0.32	+0.0
1,100,052	+		GFF2210	0.55	+0.9