Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2167

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
1,058,548	+		GFF2166	0.72	+0.3
1,059,430	-		GFF2167	0.40	+0.9
1,059,579	+		GFF2167	0.50	+0.3
1,059,699	+		GFF2167	0.59	-0.7
1,059,949	-		GFF2167	0.76	+0.4
1,060,046	-		GFF2167	0.82	+0.0
1,060,080	+		GFF2167	0.85	+0.9
1,060,233	+				-1.9
1,060,233	+				+0.4
1,060,234	-				-0.2
1,060,234	-				+1.3
1,060,509	-		GFF2168	0.24	-0.3
1,060,724	+		GFF2168	0.47	-0.6
1,060,724	+		GFF2168	0.47	+0.5
1,060,725	-		GFF2168	0.47	-0.3
1,060,725	-		GFF2168	0.47	+0.4