Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1141

Experiment: Ying_sugar7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 3
77,153	-				+0.3
77,168	-				+0.3
77,174	+				+0.0
77,174	+				-0.1
77,174	+				-0.0
77,174	+				+0.6
77,174	+				+1.8
77,175	-				-0.2
77,175	-				+0.3
77,175	-				+0.1
77,175	-				+0.3
77,177	-				-0.0
77,179	-				+0.2
77,179	-				+0.2
77,320	+				-1.3
77,321	-				+1.2
77,422	+				+0.2
77,422	+				-0.9
77,493	+				-0.2
77,493	+				-1.5
77,494	-				+0.3
77,517	+				-0.2
77,633	+				+0.2
77,660	+				-0.2
77,660	+				-0.2
77,813	+				+0.3
77,813	+				-0.1
77,814	-				+0.5
77,814	-				+1.2
77,814	-				+0.2
77,814	-				-0.8
77,814	-				-0.0
77,829	+				+0.1
77,830	-				+0.4
77,835	+				-0.4
77,835	+				+0.8
77,835	+				+0.2
77,835	+				-0.4
77,836	-				-0.1
77,836	-				+0.1
77,836	-				+1.2
77,839	+				-0.5
77,839	+				+0.4
77,839	+				-0.8
77,839	+				-0.2
77,840	+				+0.1
77,840	-				+0.6
77,840	-				+0.8
77,840	-				-0.9
77,840	-				+0.6
77,840	-				+0.2
77,840	-				-0.9
77,840	-				-0.2
77,840	-				+0.2
77,917	+				-0.6
77,937	+				-0.1
77,938	-				-1.2
78,011	+				+0.5
78,011	+				-0.1
78,011	+				-2.0
78,011	+				-0.2
78,011	+				+0.2
78,011	+				+0.4
78,015	+				-0.6
78,015	+				+0.0
78,015	+				-0.2
78,015	+				-0.4
78,015	+				-0.2
78,015	+				-0.2
78,015	+				+1.1
78,015	+				-0.2
78,015	+				-0.2
78,016	-				-0.0
78,016	-				+0.2
78,016	-				+0.2
78,016	-				-0.6
78,016	-				+0.1
78,016	-				+0.1
78,016	-				+0.2
78,099	-				+0.5
78,306	+		GFF1141	0.37	+0.0
78,306	+		GFF1141	0.37	+0.4
78,336	+		GFF1141	0.44	-0.1
78,336	+		GFF1141	0.44	+0.4
78,336	+		GFF1141	0.44	+1.0
78,337	-		GFF1141	0.44	+0.7
78,612	+				-0.6
78,612	+				+0.4
78,612	+				+0.0
78,612	+				+0.7
78,613	-				-0.1
78,613	-				-0.8
78,871	-				+0.1
79,013	+				-0.6
79,013	+				-0.0
79,013	+				-0.6
79,014	-				-0.1
79,014	-				+0.0
79,052	-				+0.1
79,085	+				-0.0
79,085	+				-0.4
79,138	-				-0.6
79,138	-				+0.8
79,158	+				+1.4
79,308	+				+1.2
79,309	-				+0.2
79,309	-				-0.0
79,343	-				+0.6
79,518	+				+0.2
79,518	+				-0.4