Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23955

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
4,566,845	-				+0.6
4,566,917	-		LU632_RS23950	0.13	+0.2
4,566,922	+		LU632_RS23950	0.14	+1.3
4,566,923	-		LU632_RS23950	0.14	-0.3
4,566,994	+		LU632_RS23950	0.21	-1.9
4,566,994	+		LU632_RS23950	0.21	-2.1
4,566,995	-		LU632_RS23950	0.21	-0.4
4,567,101	-		LU632_RS23950	0.32	-0.2
4,567,197	+		LU632_RS23950	0.42	+0.7
4,567,198	-		LU632_RS23950	0.42	-0.2
4,567,198	-		LU632_RS23950	0.42	+1.3
4,567,198	-		LU632_RS23950	0.42	-0.1
4,567,198	-		LU632_RS23950	0.42	+0.4
4,567,201	-		LU632_RS23950	0.42	-2.5
4,567,245	+		LU632_RS23950	0.47	+3.6
4,567,246	-		LU632_RS23950	0.47	+2.6
4,567,265	-		LU632_RS23950	0.49	-0.4
4,567,438	-		LU632_RS23950	0.66	+0.5
4,567,438	-		LU632_RS23950	0.66	+0.5
4,567,441	+		LU632_RS23950	0.67	-2.0
4,567,811	-	fadA	LU632_RS23955	0.12	-0.9
4,567,893	-	fadA	LU632_RS23955	0.37	-1.4
4,567,893	-	fadA	LU632_RS23955	0.37	-1.0
4,567,893	-	fadA	LU632_RS23955	0.37	-0.6
4,568,055	+	fadA	LU632_RS23955	0.86	-1.4
4,568,056	-	fadA	LU632_RS23955	0.86	-1.9
4,568,125	-				+2.3
4,568,167	+				-0.1