Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23100

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
4,398,727	-				-0.3
4,398,748	+				+0.2
4,398,787	-				+0.3
4,398,829	-				-0.5
4,398,947	-		LU632_RS23095	0.22	+1.3
4,399,059	-		LU632_RS23095	0.36	-1.4
4,399,059	-		LU632_RS23095	0.36	+0.7
4,399,102	+		LU632_RS23095	0.42	-0.2
4,399,102	+		LU632_RS23095	0.42	+0.4
4,399,103	-		LU632_RS23095	0.42	-0.5
4,399,124	+		LU632_RS23095	0.45	-0.6
4,399,124	+		LU632_RS23095	0.45	-2.0
4,399,125	-		LU632_RS23095	0.45	+0.3
4,399,132	+		LU632_RS23095	0.46	-0.1
4,399,297	+		LU632_RS23095	0.67	+1.6
4,399,484	-				+2.5
4,399,495	+				+1.9
4,399,496	-				+1.5
4,399,574	+				-2.3
4,399,603	+				-1.1
4,399,620	-				+1.3
4,399,748	-				-0.3
4,399,748	-				+1.9
4,399,856	-	ggt	LU632_RS23100	0.13	+0.1
4,399,874	-	ggt	LU632_RS23100	0.14	-0.0
4,399,903	+	ggt	LU632_RS23100	0.16	-0.4
4,399,903	+	ggt	LU632_RS23100	0.16	+0.6
4,399,952	-	ggt	LU632_RS23100	0.19	-0.4
4,399,955	+	ggt	LU632_RS23100	0.19	+0.0
4,399,955	+	ggt	LU632_RS23100	0.19	+0.4
4,399,955	+	ggt	LU632_RS23100	0.19	-1.1
4,399,956	-	ggt	LU632_RS23100	0.19	-0.3
4,399,956	-	ggt	LU632_RS23100	0.19	+0.9
4,399,956	-	ggt	LU632_RS23100	0.19	-1.4
4,400,066	-	ggt	LU632_RS23100	0.25	+3.2
4,400,158	+	ggt	LU632_RS23100	0.30	+1.9
4,400,300	+	ggt	LU632_RS23100	0.38	-0.8
4,400,306	+	ggt	LU632_RS23100	0.39	+0.5
4,400,306	+	ggt	LU632_RS23100	0.39	-0.4
4,400,362	+	ggt	LU632_RS23100	0.42	-0.1
4,400,387	+	ggt	LU632_RS23100	0.43	+0.8
4,400,494	+	ggt	LU632_RS23100	0.49	-0.1
4,400,494	+	ggt	LU632_RS23100	0.49	-0.7
4,400,494	+	ggt	LU632_RS23100	0.49	+0.4
4,400,496	+	ggt	LU632_RS23100	0.49	-0.1
4,400,496	+	ggt	LU632_RS23100	0.49	-2.4
4,400,496	+	ggt	LU632_RS23100	0.49	-0.4
4,400,496	+	ggt	LU632_RS23100	0.49	+0.2
4,400,496	+	ggt	LU632_RS23100	0.49	-1.4
4,400,496	+	ggt	LU632_RS23100	0.49	-1.7
4,400,497	-	ggt	LU632_RS23100	0.49	-3.4
4,400,497	-	ggt	LU632_RS23100	0.49	+0.2
4,400,512	+	ggt	LU632_RS23100	0.50	-1.9
4,400,513	-	ggt	LU632_RS23100	0.50	+1.5
4,400,513	-	ggt	LU632_RS23100	0.50	+0.4
4,400,572	+	ggt	LU632_RS23100	0.54	-1.7
4,400,573	-	ggt	LU632_RS23100	0.54	-3.1
4,400,583	-	ggt	LU632_RS23100	0.54	-0.5
4,400,594	-	ggt	LU632_RS23100	0.55	+0.1
4,400,794	+	ggt	LU632_RS23100	0.66	-1.4
4,400,798	+	ggt	LU632_RS23100	0.66	-0.7
4,400,798	+	ggt	LU632_RS23100	0.66	-0.2
4,400,798	+	ggt	LU632_RS23100	0.66	+1.1
4,400,798	+	ggt	LU632_RS23100	0.66	+0.0
4,400,799	-	ggt	LU632_RS23100	0.67	-1.7
4,400,799	-	ggt	LU632_RS23100	0.67	+1.5
4,400,992	+	ggt	LU632_RS23100	0.77	-0.9
4,401,067	+	ggt	LU632_RS23100	0.82	+0.7
4,401,070	+	ggt	LU632_RS23100	0.82	-2.1
4,401,147	-	ggt	LU632_RS23100	0.86	-1.1
4,401,149	+	ggt	LU632_RS23100	0.86	-0.9
4,401,149	+	ggt	LU632_RS23100	0.86	+0.2
4,401,175	+	ggt	LU632_RS23100	0.88	-0.5
4,401,176	-	ggt	LU632_RS23100	0.88	-0.6
4,401,244	+				+1.6
4,401,244	+				+0.4
4,401,268	+				+0.4
4,401,322	-				+0.6
4,401,322	-				-0.1
4,401,490	+				-0.2
4,401,494	+				-2.1
4,401,567	-				+1.8
4,401,571	-				+0.2
4,401,612	+				-0.1
4,401,613	-				-0.0
4,401,637	+				+0.0
4,401,658	-				-0.1
4,401,725	+				+0.3