Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22165

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
4,234,448	+	yihX	LU632_RS22155	0.85	-0.3
4,234,612	+				+0.3
4,234,613	-				+0.9
4,234,613	-				-1.1
4,234,630	+		LU632_RS22160	0.11	+4.4
4,234,800	-		LU632_RS22160	0.30	+1.1
4,234,883	+		LU632_RS22160	0.40	+0.9
4,234,884	-		LU632_RS22160	0.40	+0.9
4,234,884	-		LU632_RS22160	0.40	+0.0
4,235,126	+		LU632_RS22160	0.67	-1.9
4,235,127	-		LU632_RS22160	0.68	+0.1
4,235,197	-		LU632_RS22160	0.76	+0.2
4,235,229	-		LU632_RS22160	0.79	-2.1
4,235,229	-		LU632_RS22160	0.79	+0.6
4,235,249	+		LU632_RS22160	0.82	-2.8
4,235,250	-		LU632_RS22160	0.82	-0.4
4,235,261	+		LU632_RS22160	0.83	-0.1
4,235,261	+		LU632_RS22160	0.83	-1.6
4,235,261	+		LU632_RS22160	0.83	-0.5
4,235,271	+		LU632_RS22160	0.84	+2.9
4,235,317	+		LU632_RS22160	0.89	+1.0
4,235,317	+		LU632_RS22160	0.89	+0.9
4,235,325	+				-1.1
4,235,340	+				-0.7
4,235,341	-				-0.4
4,235,411	+				-0.4
4,235,490	+	dtd	LU632_RS22165	0.19	-0.1
4,235,491	-	dtd	LU632_RS22165	0.19	-2.4
4,235,541	-	dtd	LU632_RS22165	0.31	+1.5
4,235,598	+	dtd	LU632_RS22165	0.44	-1.2
4,235,599	-	dtd	LU632_RS22165	0.44	+1.2
4,235,599	-	dtd	LU632_RS22165	0.44	+1.4
4,235,722	+	dtd	LU632_RS22165	0.72	-0.2
4,235,729	-	dtd	LU632_RS22165	0.74	+4.4
4,235,900	+				+1.9
4,235,900	+				+2.0
4,235,904	+				+2.7
4,235,904	+				+2.7
4,235,904	+				+1.4
4,235,946	+				+2.7
4,235,946	+				+1.6
4,235,947	-				+4.2
4,235,976	-				+2.1
4,236,127	+	fabY	LU632_RS22170	0.24	+2.6
4,236,264	+	fabY	LU632_RS22170	0.39	-1.4
4,236,265	-	fabY	LU632_RS22170	0.39	+2.2
4,236,326	+	fabY	LU632_RS22170	0.45	+1.7
4,236,327	-	fabY	LU632_RS22170	0.45	-0.3
4,236,351	-	fabY	LU632_RS22170	0.48	+1.8
4,236,405	-	fabY	LU632_RS22170	0.54	+3.5
4,236,405	-	fabY	LU632_RS22170	0.54	+2.2
4,236,431	-	fabY	LU632_RS22170	0.56	+0.4
4,236,434	+	fabY	LU632_RS22170	0.57	+4.5
4,236,435	-	fabY	LU632_RS22170	0.57	+1.0
4,236,435	-	fabY	LU632_RS22170	0.57	+0.8
4,236,444	+	fabY	LU632_RS22170	0.58	+0.9
4,236,444	+	fabY	LU632_RS22170	0.58	+3.7
4,236,445	-	fabY	LU632_RS22170	0.58	+3.7
4,236,446	+	fabY	LU632_RS22170	0.58	+2.3
4,236,504	-	fabY	LU632_RS22170	0.64	+4.4
4,236,504	-	fabY	LU632_RS22170	0.64	+1.9
4,236,536	+	fabY	LU632_RS22170	0.68	+1.7
4,236,537	-	fabY	LU632_RS22170	0.68	-0.1
4,236,537	-	fabY	LU632_RS22170	0.68	+2.9
4,236,668	-	fabY	LU632_RS22170	0.82	+0.9
4,236,778	+				+2.0
4,236,779	-				+2.0
4,236,780	+				+2.4
4,236,780	+				+0.9
4,236,780	+				+1.2
4,236,780	+				+2.8
4,236,781	-				+2.6
4,236,781	-				+0.9
4,236,781	-				+5.7
4,236,781	-				-1.1
4,236,781	-				+2.0
4,236,781	-				+3.1
4,236,781	-				+1.9
4,236,781	-				+2.0
4,236,781	-				+1.4
4,236,781	-				-1.7
4,236,781	-				+2.4
4,236,781	-				+2.4
4,236,781	-				+2.8
4,236,781	-				+1.9
4,236,782	+				+1.7
4,236,782	+				+0.8
4,236,782	+				+0.9
4,236,782	+				+2.0
4,236,782	+				+2.3
4,236,782	+				+4.1
4,236,782	+				+2.9
4,236,782	+				+1.7
4,236,782	+				+2.5
4,236,782	+				+2.5
4,236,782	+				+1.9
4,236,782	+				+2.7
4,236,782	+				+1.7
4,236,782	+				+1.5
4,236,782	+				+2.7
4,236,783	-				+2.7
4,236,783	-				+1.7
4,236,783	-				+0.9
4,236,783	-				+1.7
4,236,783	-				+4.3
4,236,783	-				+2.1
4,236,815	-				+2.0
4,236,835	+				+0.9
4,236,835	+				-0.1