Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20125

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
3,831,765	+				+0.5
3,831,854	+				+1.8
3,831,905	+				+0.7
3,831,905	+				+1.2
3,831,905	+				-2.8
3,831,943	+		LU632_RS20120	0.11	-1.5
3,832,302	-		LU632_RS20120	0.58	+0.2
3,832,454	+		LU632_RS20120	0.78	-0.2
3,832,454	+		LU632_RS20120	0.78	-0.4
3,832,459	-		LU632_RS20120	0.78	+1.0
3,832,577	-				-0.8
3,832,614	-				+0.8
3,832,614	-				-0.5
3,832,615	+				-1.5
3,832,698	-				-2.3
3,832,724	+		LU632_RS20125	0.11	-3.5
3,832,788	-		LU632_RS20125	0.18	+0.4
3,832,925	+		LU632_RS20125	0.33	-0.2
3,832,966	+		LU632_RS20125	0.37	-0.8
3,832,967	-		LU632_RS20125	0.37	-1.7
3,832,982	+		LU632_RS20125	0.39	-2.5
3,832,992	-		LU632_RS20125	0.40	-0.2
3,833,282	+		LU632_RS20125	0.71	+0.0
3,833,543	-				+1.1
3,833,555	+				+1.9
3,833,597	-				+3.1
3,833,616	+				-1.8
3,833,617	-				-0.3
3,833,633	+				-2.5
3,833,633	+				+0.5
3,833,635	-				-1.5
3,833,683	-				-0.9
3,833,938	-	can	LU632_RS20130	0.42	-1.5
3,834,033	-	can	LU632_RS20130	0.57	-1.5
3,834,336	-				+2.1
3,834,482	-	hpt	LU632_RS20135	0.18	-0.2
3,834,492	+	hpt	LU632_RS20135	0.20	+1.2
3,834,493	-	hpt	LU632_RS20135	0.20	+0.8
3,834,493	-	hpt	LU632_RS20135	0.20	+1.6
3,834,493	-	hpt	LU632_RS20135	0.20	+3.3
3,834,541	+	hpt	LU632_RS20135	0.29	-0.8
3,834,541	+	hpt	LU632_RS20135	0.29	+0.5
3,834,542	-	hpt	LU632_RS20135	0.30	-1.2
3,834,542	-	hpt	LU632_RS20135	0.30	-0.3
3,834,542	-	hpt	LU632_RS20135	0.30	+0.4
3,834,545	+	hpt	LU632_RS20135	0.30	+0.8