Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19285

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
3,648,055	-				-0.9
3,648,075	+				+1.2
3,648,103	+				-0.3
3,648,147	+				-0.1
3,648,189	-				-1.2
3,648,206	+				+3.1
3,648,207	-				-1.5
3,648,210	-				-0.2
3,648,486	-	rsmD	LU632_RS19285	0.53	-0.5
3,648,505	-	rsmD	LU632_RS19285	0.56	-2.0
3,648,590	-	rsmD	LU632_RS19285	0.70	-1.7
3,648,630	+	rsmD	LU632_RS19285	0.77	-3.8
3,648,717	+				+0.1
3,648,726	+				+0.8
3,648,728	+				+0.8
3,648,855	-		LU632_RS19290	0.34	-0.8
3,648,949	-		LU632_RS19290	0.69	-0.5
3,649,137	+		LU632_RS19295	0.12	-1.5
3,649,221	-		LU632_RS19295	0.37	+1.2
3,649,494	-				+0.0
3,649,723	+				+0.9
3,649,723	+				+1.4
3,649,724	-				+0.4
3,649,724	-				-0.8
3,649,724	-				-1.1
3,649,738	+				+0.3