Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16465

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
3,115,812	-				+1.8
3,115,812	-				-1.1
3,115,825	+				-1.4
3,115,914	-				-0.4
3,115,914	-				-0.1
3,115,914	-				+0.2
3,115,957	-				-0.4
3,115,965	-				-2.1
3,116,008	+				+0.3
3,116,048	-				+1.1
3,116,048	-				+0.8
3,116,051	+				+1.1
3,116,051	+				-0.4
3,116,052	-				+1.3
3,116,055	+				+0.4
3,116,056	-				+0.8
3,116,080	+				+1.0
3,116,081	-				-0.6
3,116,099	-				+0.6
3,116,144	-				-0.3
3,116,172	+				+0.1
3,116,172	+				-0.4
3,116,179	+				+1.6
3,116,238	-				+0.5
3,116,253	+				-0.1
3,116,254	-				-1.0
3,116,488	+				+2.8
3,116,489	-				+0.0
3,116,489	-				-0.5
3,117,227	+				+0.6
3,117,228	-				+0.6
3,117,276	-				-0.1
3,117,276	-				-1.4
3,117,276	-				-1.7
3,117,401	+	arnT	LU632_RS16475	0.12	-3.0
3,117,442	+	arnT	LU632_RS16475	0.14	+0.4
3,117,442	+	arnT	LU632_RS16475	0.14	+0.6
3,117,442	+	arnT	LU632_RS16475	0.14	-1.3
3,117,443	-	arnT	LU632_RS16475	0.14	-1.0
3,117,443	-	arnT	LU632_RS16475	0.14	-1.7
3,117,443	-	arnT	LU632_RS16475	0.14	-2.8
3,117,546	+	arnT	LU632_RS16475	0.21	-1.0
3,117,575	-	arnT	LU632_RS16475	0.22	+0.3
3,117,789	+	arnT	LU632_RS16475	0.35	+0.6
3,117,789	+	arnT	LU632_RS16475	0.35	-1.4
3,117,789	+	arnT	LU632_RS16475	0.35	+0.1
3,117,793	-	arnT	LU632_RS16475	0.35	+0.3