Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14220

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
2,724,899	+		LU632_RS14210	0.17	+0.8
2,724,899	+		LU632_RS14210	0.17	+0.2
2,724,931	-		LU632_RS14210	0.23	-2.1
2,724,931	-		LU632_RS14210	0.23	-0.2
2,724,931	-		LU632_RS14210	0.23	-0.2
2,724,946	-		LU632_RS14210	0.25	-0.9
2,725,106	+		LU632_RS14210	0.51	-0.4
2,725,107	-		LU632_RS14210	0.51	-0.9
2,725,130	+		LU632_RS14210	0.55	+1.1
2,725,318	+		LU632_RS14210	0.86	+6.6
2,725,419	+				+0.2
2,725,419	+				+0.0
2,725,420	-				-2.6
2,725,423	-				+0.4
2,725,703	-		LU632_RS14215	0.67	+0.6
2,726,203	+		LU632_RS14220	0.47	+0.0
2,726,203	+		LU632_RS14220	0.47	-1.2
2,726,203	+		LU632_RS14220	0.47	+3.3
2,726,347	+		LU632_RS14220	0.69	-1.5
2,726,348	-		LU632_RS14220	0.69	-3.1
2,726,348	-		LU632_RS14220	0.69	-1.4
2,726,440	+		LU632_RS14220	0.83	-1.8
2,726,444	+		LU632_RS14220	0.84	-0.5
2,726,445	-		LU632_RS14220	0.84	-1.2
2,726,475	-		LU632_RS14220	0.89	+4.8
2,726,482	+		LU632_RS14220	0.90	+0.7
2,726,576	+				-0.1
2,726,576	+				+1.4
2,726,576	+				-0.1
2,726,859	-				-0.5
2,726,907	+				+1.3
2,726,910	-				-2.6
2,726,910	-				-0.6
2,726,910	-				+0.9
2,726,910	-				+0.5
2,726,910	-				+0.5
2,726,910	-				-0.1
2,726,910	-				+1.6
2,727,169	-		LU632_RS14225	0.40	+0.1