Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14145

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
2,711,385	-				-0.1
2,711,385	-				-2.1
2,711,389	+				+1.7
2,711,389	+				+0.9
2,711,390	-				+0.5
2,711,481	+				-1.1
2,711,570	-				+1.4
2,711,645	+		LU632_RS14140	0.19	-0.5
2,711,646	-		LU632_RS14140	0.19	-1.8
2,711,827	+		LU632_RS14140	0.46	+0.2
2,711,827	+		LU632_RS14140	0.46	+0.1
2,711,867	+		LU632_RS14140	0.53	+0.9
2,711,867	+		LU632_RS14140	0.53	-1.8
2,711,868	-		LU632_RS14140	0.53	+0.5
2,711,868	-		LU632_RS14140	0.53	+1.4
2,711,942	-		LU632_RS14140	0.64	+0.5
2,711,987	+		LU632_RS14140	0.71	+1.5
2,712,044	-		LU632_RS14140	0.79	-0.5
2,712,115	+				-0.5
2,712,116	-				+1.2
2,712,116	-				+0.5
2,712,156	-				+0.4
2,712,158	+				+1.6
2,712,158	+				+0.5
2,712,549	+		LU632_RS14145	0.75	-1.3
2,712,631	+				+0.8
2,712,636	+				-1.0
2,712,636	+				+3.4
2,712,636	+				-0.7
2,712,717	-				-2.5
2,712,721	-				-0.0
2,712,887	+		LU632_RS14150	0.69	-0.3
2,712,958	-				-1.5
2,713,033	-				-0.5
2,713,125	+				+0.1
2,713,126	-				-0.0
2,713,172	+				-0.5
2,713,262	-				-0.8
2,713,265	-				-2.1
2,713,265	-				-1.3
2,713,273	+				+0.3
2,713,289	-				-0.1
2,713,351	+				+0.0
2,713,386	+				+0.7
2,713,390	+				-0.3
2,713,391	-				-0.7
2,713,501	+		LU632_RS14155	0.20	+0.8
2,713,501	+		LU632_RS14155	0.20	-2.1
2,713,555	+		LU632_RS14155	0.29	-1.4