Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12855

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
2,446,498	+	cls	LU632_RS12850	0.48	-0.7
2,446,502	+	cls	LU632_RS12850	0.48	-2.2
2,446,508	-	cls	LU632_RS12850	0.48	-1.2
2,446,627	+	cls	LU632_RS12850	0.56	-1.6
2,446,689	+	cls	LU632_RS12850	0.61	+0.4
2,446,719	+	cls	LU632_RS12850	0.63	-0.6
2,447,017	-	cls	LU632_RS12850	0.83	-2.2
2,447,362	-		LU632_RS12855	0.17	+3.0
2,447,407	-		LU632_RS12855	0.31	+0.8
2,447,520	-		LU632_RS12855	0.65	+0.2
2,447,601	+				-0.6
2,447,602	-				+1.0
2,447,638	-				-1.5
2,447,765	+				+0.8
2,447,768	+				+0.3
2,447,768	+				+0.2
2,447,768	+				-0.4
2,447,768	+				+0.2
2,447,771	+				-0.6
2,447,771	+				-1.7
2,447,771	+				+0.1
2,448,021	+	oppF	LU632_RS12860	0.16	-1.0
2,448,021	+	oppF	LU632_RS12860	0.16	+0.4
2,448,022	-	oppF	LU632_RS12860	0.16	+2.1
2,448,083	+	oppF	LU632_RS12860	0.22	-0.4
2,448,086	-	oppF	LU632_RS12860	0.23	-1.0
2,448,107	-	oppF	LU632_RS12860	0.25	-1.9
2,448,118	+	oppF	LU632_RS12860	0.26	-0.6
2,448,118	+	oppF	LU632_RS12860	0.26	-0.8
2,448,119	-	oppF	LU632_RS12860	0.26	+0.7
2,448,148	+	oppF	LU632_RS12860	0.29	+0.8
2,448,149	-	oppF	LU632_RS12860	0.29	-0.4
2,448,149	-	oppF	LU632_RS12860	0.29	-1.2
2,448,203	+	oppF	LU632_RS12860	0.34	+0.6
2,448,203	+	oppF	LU632_RS12860	0.34	-0.2
2,448,204	-	oppF	LU632_RS12860	0.34	-1.9
2,448,207	+	oppF	LU632_RS12860	0.35	-0.8
2,448,268	-	oppF	LU632_RS12860	0.41	+0.4
2,448,268	-	oppF	LU632_RS12860	0.41	-0.6
2,448,314	+	oppF	LU632_RS12860	0.45	-0.7
2,448,314	+	oppF	LU632_RS12860	0.45	+0.4
2,448,512	+	oppF	LU632_RS12860	0.65	+0.4
2,448,512	+	oppF	LU632_RS12860	0.65	+1.0
2,448,512	+	oppF	LU632_RS12860	0.65	+3.2
2,448,512	+	oppF	LU632_RS12860	0.65	-1.2