Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12635

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
2,405,932	+	hrpA	LU632_RS12630	0.85	-1.2
2,406,132	+				-1.5
2,406,132	+				+0.0
2,406,215	+				+0.0
2,406,278	+				-0.2
2,406,300	+				+1.8
2,406,301	-				+0.3
2,406,354	+				+1.3
2,406,354	+				+1.4
2,406,366	+				-0.6
2,406,494	+				-1.3
2,406,575	-				+0.5
2,406,611	+				-0.8
2,406,649	-				+2.5
2,406,714	+				+0.7
2,406,714	+				+1.4
2,406,714	+				+0.2
2,406,715	-				-0.0
2,406,750	-				+4.2
2,407,025	-		LU632_RS12635	0.48	+1.9
2,407,146	+		LU632_RS12635	0.68	+2.2
2,407,201	+		LU632_RS12635	0.77	+6.9
2,407,326	+				+0.4
2,407,505	+				+1.4
2,407,530	-				+0.7
2,408,254	+		LU632_RS12645	0.53	-1.2