Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11175

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
2,136,506	+		LU632_RS11170	0.49	+2.0
2,136,507	-		LU632_RS11170	0.49	-0.6
2,136,507	-		LU632_RS11170	0.49	-0.1
2,136,507	-		LU632_RS11170	0.49	-0.6
2,136,507	-		LU632_RS11170	0.49	-0.1
2,136,526	+		LU632_RS11170	0.50	-1.4
2,136,526	+		LU632_RS11170	0.50	-0.2
2,136,787	-		LU632_RS11170	0.69	-0.6
2,136,819	+		LU632_RS11170	0.72	+2.4
2,136,888	+		LU632_RS11170	0.77	-1.1
2,136,888	+		LU632_RS11170	0.77	+0.4
2,136,921	-		LU632_RS11170	0.79	-1.1
2,136,933	+		LU632_RS11170	0.80	-2.6
2,136,984	+		LU632_RS11170	0.84	+3.4
2,136,984	+		LU632_RS11170	0.84	+0.7
2,136,984	+		LU632_RS11170	0.84	-2.0
2,136,985	-		LU632_RS11170	0.84	-0.6
2,136,985	-		LU632_RS11170	0.84	+0.6
2,136,985	-		LU632_RS11170	0.84	-2.7
2,136,996	-		LU632_RS11170	0.85	+0.0
2,136,996	-		LU632_RS11170	0.85	+1.6
2,137,036	+		LU632_RS11170	0.87	-0.2
2,137,036	+		LU632_RS11170	0.87	+0.6
2,137,160	+				-3.1
2,137,162	+				+1.0
2,137,211	+				-0.4
2,137,212	-				+1.1
2,137,212	-				-0.3
2,137,212	-				+0.6
2,137,272	-				-0.3
2,137,272	-				-1.6
2,137,272	-				+1.6
2,137,343	+				-1.1
2,137,368	-				+0.1
2,137,368	-				+0.8
2,137,368	-				-3.4
2,137,372	+				-0.0
2,137,386	+				+0.8
2,137,387	-				+1.4
2,137,431	+				-2.5
2,138,137	+				+0.9
2,138,138	-				-0.1
2,138,274	-				+1.1
2,138,276	+				-0.9
2,138,276	+				+0.9
2,138,307	+				+1.4
2,138,308	-				-1.4
2,138,412	+				+1.4
2,138,452	-				-1.3
2,138,502	+				-0.1
2,138,502	+				-0.3
2,138,503	-				+2.7
2,138,509	-		LU632_RS11180	0.10	+0.8
2,138,542	+		LU632_RS11180	0.13	+2.3
2,138,560	-		LU632_RS11180	0.15	+2.8
2,138,620	+		LU632_RS11180	0.20	-0.1
2,138,780	+		LU632_RS11180	0.33	-0.9
2,138,781	-		LU632_RS11180	0.33	-0.4
2,138,815	+		LU632_RS11180	0.36	+0.4
2,138,840	+		LU632_RS11180	0.38	-1.9
2,138,841	-		LU632_RS11180	0.38	-0.2
2,138,841	-		LU632_RS11180	0.38	+0.4
2,138,841	-		LU632_RS11180	0.38	+0.4
2,138,886	+		LU632_RS11180	0.42	+1.1
2,138,937	-		LU632_RS11180	0.47	-0.2
2,138,975	-		LU632_RS11180	0.50	-0.2
2,139,081	+		LU632_RS11180	0.59	-0.1
2,139,127	+		LU632_RS11180	0.63	+2.4