Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11045

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
2,114,140	+		LU632_RS11040	0.70	-1.1
2,114,214	+		LU632_RS11040	0.73	-0.1
2,114,325	+		LU632_RS11040	0.76	-1.0
2,114,348	-		LU632_RS11040	0.77	+1.4
2,114,348	-		LU632_RS11040	0.77	-1.0
2,114,374	-		LU632_RS11040	0.78	+1.2
2,114,380	+		LU632_RS11040	0.78	-2.4
2,114,481	+		LU632_RS11040	0.82	-0.7
2,114,482	-		LU632_RS11040	0.82	-0.3
2,114,482	-		LU632_RS11040	0.82	+0.6
2,114,660	+		LU632_RS11040	0.87	-1.1
2,114,660	+		LU632_RS11040	0.87	-1.3
2,114,661	-		LU632_RS11040	0.87	-0.6
2,114,731	+		LU632_RS11040	0.90	+0.4
2,114,731	+		LU632_RS11040	0.90	-0.3
2,114,731	+		LU632_RS11040	0.90	-0.0
2,114,732	-		LU632_RS11040	0.90	+0.5
2,114,793	+				+0.3
2,114,966	-				+2.3
2,115,043	+				+2.5
2,115,105	-		LU632_RS11045	0.14	+1.4
2,115,105	-		LU632_RS11045	0.14	-0.4
2,115,266	+		LU632_RS11045	0.50	+1.3
2,115,266	+		LU632_RS11045	0.50	-0.7
2,115,266	+		LU632_RS11045	0.50	+0.7
2,115,267	-		LU632_RS11045	0.51	+0.4
2,115,283	-		LU632_RS11045	0.54	+2.5
2,115,283	-		LU632_RS11045	0.54	-2.6
2,115,283	-		LU632_RS11045	0.54	+0.4
2,115,349	+		LU632_RS11045	0.69	+1.2
2,115,374	+		LU632_RS11045	0.75	+0.4
2,115,375	-		LU632_RS11045	0.75	+1.4
2,115,404	-		LU632_RS11045	0.82	+2.0
2,115,444	-				-0.2
2,115,470	+				+0.7
2,115,499	+				+1.0
2,115,503	+				+0.1
2,115,504	-				+0.8
2,115,654	-		LU632_RS11050	0.39	-0.2
2,115,681	+		LU632_RS11050	0.45	+1.3
2,115,682	-		LU632_RS11050	0.45	-2.1
2,115,682	-		LU632_RS11050	0.45	+0.6
2,115,703	+		LU632_RS11050	0.51	-1.6
2,115,704	-		LU632_RS11050	0.51	-1.6
2,115,707	+		LU632_RS11050	0.52	+0.4
2,115,707	+		LU632_RS11050	0.52	+0.4
2,115,707	+		LU632_RS11050	0.52	+1.0
2,115,708	-		LU632_RS11050	0.52	+0.4
2,115,708	-		LU632_RS11050	0.52	+1.3
2,115,762	-		LU632_RS11050	0.65	-0.8
2,115,801	-		LU632_RS11050	0.75	-0.3
2,115,821	-		LU632_RS11050	0.80	-0.1
2,115,854	+		LU632_RS11050	0.88	-1.4
2,115,855	-		LU632_RS11050	0.88	+3.0
2,115,855	-		LU632_RS11050	0.88	+0.4
2,115,855	-		LU632_RS11050	0.88	+0.4
2,115,855	-		LU632_RS11050	0.88	+0.8
2,115,855	-		LU632_RS11050	0.88	+1.1
2,115,856	+		LU632_RS11050	0.88	-1.0
2,115,856	+		LU632_RS11050	0.88	-2.1
2,116,056	+				-0.2
2,116,127	-				+0.6
2,116,128	+				+0.3