Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10285

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
1,964,705	-	mdoH	LU632_RS10275	0.86	+0.5
1,964,740	+	mdoH	LU632_RS10275	0.87	-3.2
1,964,782	-	mdoH	LU632_RS10275	0.89	+0.5
1,965,004	+				-2.3
1,965,005	-				+0.5
1,965,026	-				-0.9
1,965,262	+		LU632_RS10280	0.20	-0.3
1,965,262	+		LU632_RS10280	0.20	+0.9
1,965,262	+		LU632_RS10280	0.20	+0.8
1,965,262	+		LU632_RS10280	0.20	-0.0
1,965,263	-		LU632_RS10280	0.21	+0.8
1,965,263	-		LU632_RS10280	0.21	-1.6
1,965,281	+		LU632_RS10280	0.28	-0.6
1,965,282	-		LU632_RS10280	0.29	+0.4
1,965,324	+		LU632_RS10280	0.46	+0.9
1,965,377	+		LU632_RS10280	0.68	+0.9
1,965,453	+				-0.5
1,965,454	-				-2.1
1,965,454	-				+0.5
1,965,457	+				+3.1
1,965,457	+				-1.1
1,965,458	-				-0.7
1,965,466	+				-0.3
1,965,466	+				+1.5
1,965,466	+				+0.0
1,965,467	-				+1.3
1,965,483	-				+0.5
1,965,578	+		LU632_RS10285	0.30	-0.5
1,965,579	-		LU632_RS10285	0.30	-1.8
1,965,716	+		LU632_RS10285	0.64	-0.7
1,965,716	+		LU632_RS10285	0.64	-1.3
1,965,716	+		LU632_RS10285	0.64	-0.3
1,965,717	-		LU632_RS10285	0.65	+0.1
1,965,717	-		LU632_RS10285	0.65	+0.8
1,965,717	-		LU632_RS10285	0.65	-0.2
1,965,717	-		LU632_RS10285	0.65	-0.6
1,965,717	-		LU632_RS10285	0.65	-1.8
1,965,717	-		LU632_RS10285	0.65	-0.3
1,965,740	-		LU632_RS10285	0.70	+0.8
1,965,949	+				-0.6
1,966,130	-				-0.7
1,966,198	+				-0.5
1,966,198	+				+1.2
1,966,199	-				+1.5
1,966,199	-				+3.2
1,966,199	-				+3.0
1,966,202	+				-1.2
1,966,203	-				-0.1
1,966,203	-				+1.4
1,966,203	-				-1.5
1,966,203	-				+1.3
1,966,203	-				+1.9
1,966,286	-		LU632_RS10290	0.15	-0.5
1,966,316	+		LU632_RS10290	0.20	+1.9
1,966,316	+		LU632_RS10290	0.20	-0.8
1,966,316	+		LU632_RS10290	0.20	+0.6
1,966,421	-		LU632_RS10290	0.39	+0.8
1,966,453	-		LU632_RS10290	0.44	-0.5
1,966,462	+		LU632_RS10290	0.46	+0.0
1,966,492	+		LU632_RS10290	0.51	-0.1
1,966,524	+		LU632_RS10290	0.57	+0.4
1,966,524	+		LU632_RS10290	0.57	-1.2
1,966,524	+		LU632_RS10290	0.57	-3.4
1,966,525	-		LU632_RS10290	0.57	+0.2
1,966,629	-		LU632_RS10290	0.76	-1.5
1,966,683	-		LU632_RS10290	0.86	+0.1
1,966,726	+				+1.5
1,966,729	+				+1.1
1,966,729	+				-0.5
1,966,730	-				-0.1
1,966,730	-				-0.8
1,966,730	-				+1.2
1,966,730	-				-1.1
1,966,730	-				-1.9
1,966,740	+				-2.5
1,966,742	+				+0.3
1,966,742	+				-1.1
1,966,748	+				+0.5