Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09610

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
1,820,196	+	ybjG	LU632_RS09605	0.29	+0.1
1,820,196	+	ybjG	LU632_RS09605	0.29	+0.4
1,820,196	+	ybjG	LU632_RS09605	0.29	-1.3
1,820,237	+	ybjG	LU632_RS09605	0.36	-0.4
1,820,237	+	ybjG	LU632_RS09605	0.36	+0.2
1,820,238	-	ybjG	LU632_RS09605	0.36	+2.6
1,820,238	-	ybjG	LU632_RS09605	0.36	-2.4
1,820,241	-	ybjG	LU632_RS09605	0.37	+0.3
1,820,281	+	ybjG	LU632_RS09605	0.43	-0.3
1,820,339	+	ybjG	LU632_RS09605	0.53	-0.7
1,820,339	+	ybjG	LU632_RS09605	0.53	+0.4
1,820,404	+	ybjG	LU632_RS09605	0.64	+0.3
1,820,405	-	ybjG	LU632_RS09605	0.64	+0.5
1,820,416	-	ybjG	LU632_RS09605	0.66	-0.0
1,820,624	+				+0.6
1,820,625	-				-0.8
1,820,628	+				+1.8
1,820,632	-				+0.6
1,820,721	-				-0.8
1,820,735	+				-0.5
1,820,768	-				-0.3
1,820,768	-				-0.6
1,820,768	-				-1.0
1,820,768	-				-0.4
1,820,768	-				-0.8
1,820,804	-				+1.6
1,820,823	-				+1.7
1,820,823	-				-0.0
1,820,823	-				-0.1
1,820,823	-				+2.5
1,820,827	-				-0.0
1,820,995	+				+1.3
1,821,029	-				+0.6
1,822,319	+				-2.6
1,822,338	+				+0.6
1,822,339	-				+0.1
1,822,389	+				-1.4
1,822,390	-				+0.5
1,822,390	-				-1.4
1,822,500	+		LU632_RS09615	0.11	-0.1
1,822,500	+		LU632_RS09615	0.11	+1.4
1,822,501	-		LU632_RS09615	0.11	-0.3
1,822,617	+		LU632_RS09615	0.18	-1.1
1,822,638	-		LU632_RS09615	0.20	+1.3
1,822,670	+		LU632_RS09615	0.22	+0.7
1,822,670	+		LU632_RS09615	0.22	-1.9
1,822,671	-		LU632_RS09615	0.22	-0.8
1,822,671	-		LU632_RS09615	0.22	+1.9
1,822,681	-		LU632_RS09615	0.22	-0.1
1,822,727	-		LU632_RS09615	0.25	+1.6
1,822,741	-		LU632_RS09615	0.26	+0.9
1,822,741	-		LU632_RS09615	0.26	-0.6
1,822,782	+		LU632_RS09615	0.28	-2.1
1,822,782	+		LU632_RS09615	0.28	-1.0
1,822,782	+		LU632_RS09615	0.28	-0.2
1,822,824	+		LU632_RS09615	0.31	-0.6
1,822,912	+		LU632_RS09615	0.36	+2.8
1,822,912	+		LU632_RS09615	0.36	+0.6
1,822,912	+		LU632_RS09615	0.36	+0.0
1,822,913	-		LU632_RS09615	0.36	+1.1
1,822,913	-		LU632_RS09615	0.36	+1.3
1,822,913	-		LU632_RS09615	0.36	+0.5
1,822,969	+		LU632_RS09615	0.40	-0.3
1,822,970	-		LU632_RS09615	0.40	+0.4
1,822,970	-		LU632_RS09615	0.40	+0.6
1,822,970	-		LU632_RS09615	0.40	+1.8
1,823,025	+		LU632_RS09615	0.43	+0.7
1,823,026	-		LU632_RS09615	0.43	-0.4
1,823,106	+		LU632_RS09615	0.48	+1.3
1,823,237	+		LU632_RS09615	0.56	+0.6
1,823,241	+		LU632_RS09615	0.56	-0.1
1,823,241	+		LU632_RS09615	0.56	-2.6
1,823,241	+		LU632_RS09615	0.56	+3.0
1,823,241	+		LU632_RS09615	0.56	-0.7
1,823,242	-		LU632_RS09615	0.56	-0.8
1,823,259	+		LU632_RS09615	0.57	-0.2
1,823,260	-		LU632_RS09615	0.57	+0.2