Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09410

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
1,781,207	+	ybiB	LU632_RS09405	0.27	-0.2
1,781,207	+	ybiB	LU632_RS09405	0.27	+0.6
1,781,208	-	ybiB	LU632_RS09405	0.27	-1.0
1,781,347	+	ybiB	LU632_RS09405	0.41	-2.0
1,781,347	+	ybiB	LU632_RS09405	0.41	-1.5
1,781,348	-	ybiB	LU632_RS09405	0.41	+0.6
1,781,349	+	ybiB	LU632_RS09405	0.41	+0.9
1,781,564	+	ybiB	LU632_RS09405	0.64	+0.7
1,781,564	+	ybiB	LU632_RS09405	0.64	+0.2
1,781,566	+	ybiB	LU632_RS09405	0.64	-2.4
1,781,566	+	ybiB	LU632_RS09405	0.64	+0.3
1,781,567	-	ybiB	LU632_RS09405	0.64	+0.5
1,781,642	+	ybiB	LU632_RS09405	0.72	+0.1
1,781,671	+	ybiB	LU632_RS09405	0.75	+1.8
1,781,849	+				-2.0
1,781,849	+				+1.6
1,781,850	-				-0.5
1,781,850	-				+0.6
1,781,869	-				-0.6
1,781,912	+				+0.2
1,781,915	+				-0.7
1,781,915	+				+0.6
1,781,916	-				-1.0
1,781,928	-				+2.1
1,781,969	+				-0.4
1,781,969	+				+0.7
1,781,969	+				+0.0
1,781,969	+				-1.5
1,781,970	-				+0.5
1,781,970	-				-2.5
1,781,980	+				-0.5
1,781,981	-				+2.7
1,782,044	-				+0.6
1,782,118	+		LU632_RS09410	0.15	+2.2
1,782,119	-		LU632_RS09410	0.15	+2.3
1,782,377	+		LU632_RS09410	0.67	+0.6
1,782,605	-				+0.6
1,782,700	-				-1.7
1,782,711	+				+0.4
1,782,712	-				-1.1
1,782,723	-				-0.5
1,782,729	+				-1.0
1,782,775	+		LU632_RS09415	0.13	+0.7
1,782,776	-		LU632_RS09415	0.13	-0.2
1,782,800	+		LU632_RS09415	0.15	-0.1
1,782,926	+		LU632_RS09415	0.26	-0.4
1,782,927	-		LU632_RS09415	0.26	-1.3
1,782,933	+		LU632_RS09415	0.27	+0.2
1,782,933	+		LU632_RS09415	0.27	+0.1
1,782,934	-		LU632_RS09415	0.27	-0.4
1,783,228	+		LU632_RS09415	0.52	-1.7
1,783,322	+		LU632_RS09415	0.60	+0.8
1,783,409	-		LU632_RS09415	0.68	+4.5
1,783,409	-		LU632_RS09415	0.68	+1.3
1,783,443	+		LU632_RS09415	0.70	+0.1
1,783,444	-		LU632_RS09415	0.71	+0.6
1,783,446	+		LU632_RS09415	0.71	-0.1
1,783,447	-		LU632_RS09415	0.71	+0.4
1,783,507	+		LU632_RS09415	0.76	-0.1
1,783,507	+		LU632_RS09415	0.76	+0.6
1,783,508	-		LU632_RS09415	0.76	-0.7