Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08110

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
1,517,412	+	menD	LU632_RS08105	0.53	-0.7
1,517,412	+	menD	LU632_RS08105	0.53	-2.9
1,517,413	-	menD	LU632_RS08105	0.53	-0.1
1,517,489	-	menD	LU632_RS08105	0.58	+0.3
1,517,517	+	menD	LU632_RS08105	0.59	-0.3
1,517,758	+	menD	LU632_RS08105	0.74	+0.5
1,517,759	-	menD	LU632_RS08105	0.74	-0.9
1,517,759	-	menD	LU632_RS08105	0.74	-0.3
1,517,959	-	menD	LU632_RS08105	0.86	+2.4
1,518,052	+				-1.7
1,518,053	-				-0.1
1,518,053	-				-0.2
1,518,053	-				+1.8
1,518,055	+				+0.1
1,518,140	+				+0.7
1,518,395	-	menH	LU632_RS08110	0.27	-0.1
1,518,395	-	menH	LU632_RS08110	0.27	+1.3
1,518,395	-	menH	LU632_RS08110	0.27	+0.9
1,518,471	+	menH	LU632_RS08110	0.37	+0.7
1,518,472	-	menH	LU632_RS08110	0.37	+0.7
1,518,472	-	menH	LU632_RS08110	0.37	-0.7
1,518,472	-	menH	LU632_RS08110	0.37	+0.7
1,518,472	-	menH	LU632_RS08110	0.37	+0.3
1,518,475	-	menH	LU632_RS08110	0.37	+0.7
1,518,532	-	menH	LU632_RS08110	0.45	+0.3
1,518,548	+	menH	LU632_RS08110	0.47	-2.7
1,518,637	-	menH	LU632_RS08110	0.59	+0.7
1,518,662	+	menH	LU632_RS08110	0.62	+0.1
1,518,942	-				-0.7
1,518,942	-				-1.7
1,518,942	-				+0.3
1,518,951	+				+3.0
1,519,003	+				-0.7
1,519,243	-	menB	LU632_RS08115	0.33	+0.3
1,519,270	+	menB	LU632_RS08115	0.36	-1.5
1,519,271	-	menB	LU632_RS08115	0.36	-1.7
1,519,271	-	menB	LU632_RS08115	0.36	+0.7
1,519,271	-	menB	LU632_RS08115	0.36	-0.9
1,519,271	-	menB	LU632_RS08115	0.36	-0.8
1,519,271	-	menB	LU632_RS08115	0.36	+0.0
1,519,271	-	menB	LU632_RS08115	0.36	-0.5
1,519,394	+	menB	LU632_RS08115	0.50	+0.2
1,519,438	+	menB	LU632_RS08115	0.55	-1.7
1,519,439	-	menB	LU632_RS08115	0.55	-3.1
1,519,470	+	menB	LU632_RS08115	0.59	+0.1
1,519,470	+	menB	LU632_RS08115	0.59	-1.3
1,519,470	+	menB	LU632_RS08115	0.59	-0.3
1,519,470	+	menB	LU632_RS08115	0.59	+1.2
1,519,471	-	menB	LU632_RS08115	0.59	+0.1
1,519,471	-	menB	LU632_RS08115	0.59	+1.6
1,519,471	-	menB	LU632_RS08115	0.59	+0.7
1,519,526	-	menB	LU632_RS08115	0.66	+6.7
1,519,530	+	menB	LU632_RS08115	0.66	-1.7
1,519,531	-	menB	LU632_RS08115	0.66	-0.9
1,519,531	-	menB	LU632_RS08115	0.66	-2.7
1,519,735	-				-0.0
1,519,735	-				+0.5
1,519,845	-				-1.1