Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07125

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
1,349,132	+		LU632_RS07120	0.58	-0.2
1,349,132	+		LU632_RS07120	0.58	+3.3
1,349,133	-		LU632_RS07120	0.58	-1.3
1,349,133	-		LU632_RS07120	0.58	+0.8
1,349,133	-		LU632_RS07120	0.58	-0.2
1,349,134	+		LU632_RS07120	0.58	+1.0
1,349,134	+		LU632_RS07120	0.58	+0.1
1,349,134	+		LU632_RS07120	0.58	+1.2
1,349,135	-		LU632_RS07120	0.58	-0.3
1,349,135	-		LU632_RS07120	0.58	+0.1
1,349,135	-		LU632_RS07120	0.58	+2.1
1,349,135	-		LU632_RS07120	0.58	+0.1
1,349,168	+		LU632_RS07120	0.60	-0.3
1,349,169	-		LU632_RS07120	0.60	-0.3
1,349,375	+		LU632_RS07120	0.70	+0.8
1,349,375	+		LU632_RS07120	0.70	+0.2
1,349,375	+		LU632_RS07120	0.70	+0.7
1,349,376	-		LU632_RS07120	0.70	+1.3
1,349,376	-		LU632_RS07120	0.70	-1.9
1,349,376	-		LU632_RS07120	0.70	-0.5
1,349,376	-		LU632_RS07120	0.70	-0.3
1,349,376	-		LU632_RS07120	0.70	-1.6
1,349,489	-		LU632_RS07120	0.76	-1.1
1,349,511	-		LU632_RS07120	0.77	-0.0
1,349,574	+		LU632_RS07120	0.80	+0.3
1,349,614	-		LU632_RS07120	0.82	-2.6
1,349,692	-		LU632_RS07120	0.86	+0.9
1,349,783	-				-1.9
1,349,912	-				-0.6
1,349,912	-				+1.4
1,349,912	-				-0.9
1,349,915	+				+3.0
1,349,915	+				-0.9
1,349,915	+				-0.6
1,349,916	+				-1.8
1,349,916	-				-0.2
1,349,916	-				+0.1
1,349,917	+				+0.5
1,349,918	-				+0.0
1,349,941	-				+0.4
1,349,941	-				-1.3
1,350,068	+				-0.6
1,350,068	+				-0.1
1,350,068	+				+0.7
1,350,068	+				+0.7
1,350,068	+				+0.7
1,350,069	-				-0.0
1,350,069	-				+0.7
1,350,109	+				+0.7
1,350,110	-				-0.9
1,350,402	-		LU632_RS07125	0.35	+1.4
1,350,601	-		LU632_RS07125	0.57	-1.3
1,350,729	+		LU632_RS07125	0.71	+1.0
1,350,730	-		LU632_RS07125	0.71	+2.2
1,350,830	+		LU632_RS07125	0.82	-3.0
1,350,945	-				-0.3
1,350,945	-				+2.7
1,351,103	+				+0.2
1,351,544	+		LU632_RS07130	0.42	+0.7
1,351,565	-		LU632_RS07130	0.43	-1.3
1,351,568	+		LU632_RS07130	0.44	-0.9
1,351,568	+		LU632_RS07130	0.44	-4.0
1,351,569	-		LU632_RS07130	0.44	+0.9
1,351,569	-		LU632_RS07130	0.44	-0.2
1,351,592	+		LU632_RS07130	0.45	-1.3
1,351,592	+		LU632_RS07130	0.45	-1.7