Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05115

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
993,157	-		LU632_RS05105	0.62	+1.2
993,252	-		LU632_RS05105	0.73	+0.8
993,357	+		LU632_RS05105	0.86	+0.8
993,432	+				-1.8
993,432	+				-3.8
993,432	+				-2.9
993,432	+				+1.3
993,432	+				-0.2
993,433	-				+0.7
993,433	-				+0.8
993,433	-				-0.3
993,433	-				-0.1
993,462	+				+1.7
993,462	+				+0.8
993,466	+				+0.2
993,467	-				-2.6
993,467	-				+1.1
993,467	-				+2.2
993,502	-				-0.5
993,502	-				-1.9
993,504	+				-0.4
993,504	+				-0.1
993,505	-				-0.1
993,817	-		LU632_RS05110	0.69	-1.2
993,817	-		LU632_RS05110	0.69	+2.5
993,817	-		LU632_RS05110	0.69	+0.8
993,817	-		LU632_RS05110	0.69	-1.5
993,817	-		LU632_RS05110	0.69	-1.2
993,817	-		LU632_RS05110	0.69	+0.1
993,873	+		LU632_RS05110	0.82	-0.6
994,122	+				-0.7
994,122	+				-0.8
994,123	-				-2.2
994,435	+		LU632_RS05115	0.90	-1.6
994,435	+		LU632_RS05115	0.90	+4.7
994,436	-				-2.2
994,436	-				-1.2
994,450	+				-0.3
994,503	-		LU632_RS05120	0.14	-0.9
994,685	+		LU632_RS05120	0.88	-1.8
994,716	+				-0.8
994,716	+				+0.4
994,717	-				-0.7
994,750	+				+0.5
994,751	-				+0.0
994,769	-				+2.9
994,978	+		LU632_RS05125	0.60	-0.4
995,093	-		LU632_RS05125	0.90	-0.1
995,464	+		LU632_RS05130	0.90	+1.6