Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS03770

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
749,226	+				-1.2
749,226	+				-0.4
749,227	-				-0.2
749,227	-				+0.4
749,233	+				+0.8
749,270	-				-1.1
749,275	+				+3.4
749,276	-				+0.1
749,373	-				+1.7
749,599	+				+0.5
749,726	-				-0.2
749,979	+				+0.6
749,988	+				+1.4
750,003	+				-1.8
750,037	+				+4.0
750,037	+				+0.1
750,038	-				+0.7
750,038	-				+0.1
750,151	+				-0.1
750,151	+				+2.4
750,151	+				+0.5
750,151	+				-1.0
750,151	+				-0.0
750,189	-				+1.2
750,395	+		LU632_RS03770	0.38	+0.2
750,396	-		LU632_RS03770	0.38	+1.7
750,467	+		LU632_RS03770	0.52	+0.8
750,468	-		LU632_RS03770	0.52	+0.4
750,535	-		LU632_RS03770	0.66	-0.7
750,539	+		LU632_RS03770	0.66	-1.7
750,588	+		LU632_RS03770	0.76	-1.5
750,589	-		LU632_RS03770	0.76	+1.2
750,608	-		LU632_RS03770	0.80	+5.2
750,608	-		LU632_RS03770	0.80	+3.7
750,700	+				+1.5
750,700	+				+2.2
750,701	-				-0.2
750,731	-				+1.8
750,783	+				-0.5
750,784	-				+1.0
750,784	-				+0.3
750,784	-				+0.2
750,836	+	tssJ	LU632_RS03775	0.20	-1.7
750,836	+	tssJ	LU632_RS03775	0.20	+0.6
750,837	-	tssJ	LU632_RS03775	0.20	-0.8
750,972	+	tssJ	LU632_RS03775	0.45	+0.6
751,027	+	tssJ	LU632_RS03775	0.55	+3.4
751,028	-	tssJ	LU632_RS03775	0.55	+0.2
751,198	+	tssJ	LU632_RS03775	0.87	-1.1
751,264	-				+0.7
751,557	-	tssK	LU632_RS03780	0.22	-0.2
751,642	+	tssK	LU632_RS03780	0.28	+0.2
751,643	-	tssK	LU632_RS03780	0.28	+1.1