Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS01875

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
360,440	+				-0.3
360,440	+				-2.4
360,441	-				-0.3
360,441	-				-0.1
360,441	-				+0.7
360,441	-				-0.3
360,444	+				-1.4
360,493	+				+2.6
360,497	+				+0.3
360,497	+				+2.5
360,498	-				-0.1
360,501	+				+0.8
360,501	+				-2.3
360,501	+				+1.0
360,502	+				-0.6
360,507	-				+0.5
360,567	-				+0.9
360,569	+				-1.1
360,653	+		LU632_RS01875	0.27	+1.7
360,704	+		LU632_RS01875	0.42	+3.5
360,719	+		LU632_RS01875	0.46	-1.4
360,719	+		LU632_RS01875	0.46	+1.7
360,720	-		LU632_RS01875	0.46	+2.7
360,820	-		LU632_RS01875	0.75	-0.3
360,820	-		LU632_RS01875	0.75	-0.1
360,895	-				+2.5
360,895	-				-0.1
360,924	-				-0.7
360,942	+				+0.9
360,983	-				+0.3
361,021	+				+0.3
361,055	+				+1.5
361,084	+				-0.9
361,185	-				-0.2
361,185	-				+0.7
361,223	+				-0.3
361,275	+				-1.5
361,276	-				+1.6
361,288	-				+1.7
361,799	-	epmB	LU632_RS01880	0.50	-2.5