Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00510

Experiment: Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1)
103,541	+		LU632_RS00505	0.78	-1.9
103,695	-				+1.9
103,695	-				+0.9
103,789	+				+2.1
103,814	-				-0.7
103,840	-				+1.2
104,062	+	sicA	LU632_RS00510	0.27	+0.2
104,213	+	sicA	LU632_RS00510	0.55	+0.8
104,308	-	sicA	LU632_RS00510	0.72	+1.8
104,353	+	sicA	LU632_RS00510	0.81	-0.1
104,636	+				+2.1
104,829	+	sctE	LU632_RS00515	0.19	-1.0
104,980	+	sctE	LU632_RS00515	0.27	-0.6
105,002	-	sctE	LU632_RS00515	0.28	+0.3
105,116	-	sctE	LU632_RS00515	0.35	+0.9
105,217	-	sctE	LU632_RS00515	0.40	+0.7
105,220	+	sctE	LU632_RS00515	0.40	+1.1
105,335	+	sctE	LU632_RS00515	0.46	-0.1
105,336	-	sctE	LU632_RS00515	0.46	-2.3
105,339	+	sctE	LU632_RS00515	0.46	+3.3
105,381	+	sctE	LU632_RS00515	0.49	+0.1