Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF939

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
671,115	-		GFF938	0.13	+0.1
671,120	+		GFF938	0.13	-0.6
671,504	-		GFF938	0.50	+0.2
671,504	-		GFF938	0.50	+0.4
671,504	-		GFF938	0.50	+0.6
671,504	-		GFF938	0.50	+1.1
671,705	-		GFF938	0.69	-0.8
672,111	+				-0.8
672,112	-				-0.4
672,112	-				+0.2
672,223	+		GFF939	0.10	-0.6
672,491	-		GFF939	0.32	-0.1
672,541	+		GFF939	0.36	+0.5
672,541	+		GFF939	0.36	-0.6
672,676	+		GFF939	0.47	-0.2
672,676	+		GFF939	0.47	-1.1
672,677	-		GFF939	0.47	+0.1
672,677	-		GFF939	0.47	-0.5
672,904	-		GFF939	0.65	-2.1
672,904	-		GFF939	0.65	+0.1
672,997	+		GFF939	0.73	-0.3
673,320	+				-0.9
673,320	+				+0.7
673,321	-				+1.0
673,402	+				-0.1
673,422	+		GFF940	0.11	-0.2
673,422	+		GFF940	0.11	+0.5
673,422	+		GFF940	0.11	-0.4
673,422	+		GFF940	0.11	+0.2
673,423	-		GFF940	0.12	+2.0
673,423	-		GFF940	0.12	+0.1
673,511	+		GFF940	0.22	+0.0
673,511	+		GFF940	0.22	-0.2
673,512	-		GFF940	0.22	-0.4
673,512	-		GFF940	0.22	-0.1
673,512	-		GFF940	0.22	+0.5
673,512	-		GFF940	0.22	-0.2
673,512	-		GFF940	0.22	-0.5
673,761	+		GFF940	0.51	-0.3
673,762	-		GFF940	0.51	+0.7
674,017	-		GFF940	0.81	+0.6
674,022	+		GFF940	0.81	+0.4
674,023	-		GFF940	0.81	-1.1
674,023	-		GFF940	0.81	-0.4
674,100	+				-0.3
674,146	+				+0.7
674,155	-				-1.6
674,155	-				-0.1
674,205	+				-0.0