Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF78

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
77,046	+		GFF77	0.68	+1.1
77,073	+		GFF77	0.70	+0.4
77,074	-		GFF77	0.70	-1.0
77,074	-		GFF77	0.70	+0.1
77,226	+		GFF77	0.80	-0.6
77,226	+		GFF77	0.80	-0.3
77,226	+		GFF77	0.80	-0.8
77,227	-		GFF77	0.80	-0.4
77,227	-		GFF77	0.80	-0.5
77,362	-		GFF77	0.88	+0.2
77,391	+				-0.6
77,791	+		GFF78	0.12	-0.3
77,986	+		GFF78	0.25	-0.4
78,382	+		GFF78	0.49	+0.7
78,383	-		GFF78	0.49	-0.8
78,733	+		GFF78	0.71	+0.5
78,734	-		GFF78	0.71	+0.7
78,739	+		GFF78	0.71	-0.0
78,880	+		GFF78	0.80	-1.6
79,189	+				+0.1
79,189	+				-0.2
79,190	-				-0.4
79,190	-				-0.8
80,087	+				-1.2