Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5767

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
2,793,138	-				-0.5
2,793,241	-				+0.2
2,793,339	+				-1.9
2,793,351	+				-1.6
2,793,555	+		GFF5766	0.35	-1.3
2,793,555	+		GFF5766	0.35	-1.9
2,793,696	+		GFF5766	0.54	-2.9
2,793,696	+		GFF5766	0.54	-1.6
2,793,702	+		GFF5766	0.55	-1.9
2,793,702	+		GFF5766	0.55	-1.9
2,793,702	+		GFF5766	0.55	-3.8
2,793,702	+		GFF5766	0.55	-3.7
2,793,789	+		GFF5766	0.66	-2.6
2,793,789	+		GFF5766	0.66	-3.2
2,793,789	+		GFF5766	0.66	-3.3
2,793,789	+		GFF5766	0.66	-1.3
2,793,789	+		GFF5766	0.66	-1.9
2,793,789	+		GFF5766	0.66	-1.3
2,793,789	+		GFF5766	0.66	-3.1
2,793,828	+		GFF5766	0.72	-3.2
2,793,829	-		GFF5766	0.72	-0.3
2,795,489	+		GFF5767	0.73	-0.0
2,795,489	+		GFF5767	0.73	-1.0
2,795,489	+		GFF5767	0.73	-1.3
2,795,490	-		GFF5767	0.73	-1.6
2,795,490	-		GFF5767	0.73	+0.4
2,795,675	+		GFF5767	0.82	-1.9
2,795,675	+		GFF5767	0.82	-1.6
2,795,676	-		GFF5767	0.82	-2.7
2,795,676	-		GFF5767	0.82	-1.6
2,795,975	+				-0.5
2,795,976	+				-1.0
2,796,316	+		GFF5768	0.22	-6.8
2,796,316	+		GFF5768	0.22	-2.7
2,796,317	-		GFF5768	0.22	-5.3
2,796,889	+		GFF5768	0.69	-5.1
2,796,890	-		GFF5768	0.69	-2.9