Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5153

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
2,167,996	+				+0.0
2,167,997	-				-0.8
2,168,159	+		GFF5153	0.27	-0.2
2,168,160	-		GFF5153	0.27	+0.2
2,168,160	-		GFF5153	0.27	-0.7
2,168,160	-		GFF5153	0.27	-1.7
2,168,160	-		GFF5153	0.27	-0.2
2,168,160	-		GFF5153	0.27	-1.1
2,168,160	-		GFF5153	0.27	-0.5
2,168,219	+		GFF5153	0.40	+0.3
2,168,219	+		GFF5153	0.40	+0.1
2,168,219	+		GFF5153	0.40	-1.2
2,168,219	+		GFF5153	0.40	-2.1
2,168,220	-		GFF5153	0.40	-3.1
2,168,220	-		GFF5153	0.40	-2.4
2,168,220	-		GFF5153	0.40	-3.9
2,168,220	-		GFF5153	0.40	-1.3
2,168,220	-		GFF5153	0.40	-1.1
2,168,408	+		GFF5153	0.82	-1.6
2,168,408	+		GFF5153	0.82	-1.2
2,168,408	+		GFF5153	0.82	+0.3
2,168,408	+		GFF5153	0.82	-0.8
2,168,409	-		GFF5153	0.82	-1.3
2,168,409	-		GFF5153	0.82	-0.8
2,168,409	-		GFF5153	0.82	-0.3
2,168,409	-		GFF5153	0.82	-2.0
2,168,409	-		GFF5153	0.82	-1.4
2,168,429	+		GFF5153	0.87	-0.8
2,168,430	-		GFF5153	0.87	-0.6
2,168,430	-		GFF5153	0.87	-0.8
2,168,580	+				+0.6
2,168,967	+		GFF5154	0.55	+0.6
2,168,968	-		GFF5154	0.55	-0.4
2,169,022	+		GFF5154	0.65	+0.2
2,169,023	-		GFF5154	0.65	+0.6
2,169,023	-		GFF5154	0.65	+0.1
2,169,023	-		GFF5154	0.65	+0.3
2,169,023	-		GFF5154	0.65	-1.9
2,169,403	+		GFF5155	0.27	+0.8
2,169,403	+		GFF5155	0.27	+0.2
2,169,403	+		GFF5155	0.27	+0.1
2,169,403	+		GFF5155	0.27	+0.4
2,169,403	+		GFF5155	0.27	+0.2
2,169,404	-		GFF5155	0.27	+1.2
2,169,404	-		GFF5155	0.27	+0.1