Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4832

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
1,842,728	+		GFF4830	0.56	+0.1
1,843,046	+				+0.5
1,843,047	-				+0.0
1,843,095	-				+0.2
1,843,379	+		GFF4831	0.34	+0.1
1,843,379	+		GFF4831	0.34	-0.3
1,843,379	+		GFF4831	0.34	+0.2
1,843,379	+		GFF4831	0.34	-0.0
1,843,380	-		GFF4831	0.34	+0.7
1,843,380	-		GFF4831	0.34	-0.2
1,843,380	-		GFF4831	0.34	+0.5
1,843,430	+		GFF4831	0.45	-0.1
1,843,431	-		GFF4831	0.45	-1.0
1,843,431	-		GFF4831	0.45	+0.3
1,843,738	+				+0.0
1,843,807	+		GFF4832	0.14	+0.1
1,843,894	+		GFF4832	0.24	+0.1
1,844,137	+		GFF4832	0.52	-0.4
1,844,137	+		GFF4832	0.52	+1.7
1,844,137	+		GFF4832	0.52	+0.2
1,844,137	+		GFF4832	0.52	-0.2
1,844,137	+		GFF4832	0.52	-1.0
1,844,137	+		GFF4832	0.52	-0.6
1,844,137	+		GFF4832	0.52	-0.2
1,844,137	+		GFF4832	0.52	+0.3
1,844,138	-		GFF4832	0.52	+0.7
1,844,138	-		GFF4832	0.52	+0.2
1,844,138	-		GFF4832	0.52	-0.9
1,844,138	-		GFF4832	0.52	+0.2
1,844,171	-		GFF4832	0.56	+1.0
1,844,171	-		GFF4832	0.56	+0.1
1,844,171	-		GFF4832	0.56	-0.2
1,844,171	-		GFF4832	0.56	-0.1
1,844,228	-		GFF4832	0.63	-0.4
1,844,395	+		GFF4832	0.82	-0.4
1,844,395	+		GFF4832	0.82	+0.7
1,844,396	-		GFF4832	0.82	+1.0
1,844,407	+		GFF4832	0.83	-0.8
1,844,408	-		GFF4832	0.83	-0.3
1,844,468	-				+1.1
1,844,807	+		GFF4833	0.40	-0.3
1,844,807	+		GFF4833	0.40	+0.2
1,844,808	-		GFF4833	0.40	+0.6
1,844,808	-		GFF4833	0.40	-0.1
1,845,294	+		GFF4834	0.18	+0.5
1,845,522	+		GFF4834	0.56	-0.2
1,845,522	+		GFF4834	0.56	+0.3
1,845,523	-		GFF4834	0.57	+0.7