Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF48

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
48,008	+		GFF47	0.83	+0.7
48,275	-				-0.0
48,439	+		GFF48	0.20	-1.5
48,440	-		GFF48	0.20	+0.9
48,581	-		GFF48	0.32	+0.0
48,614	-		GFF48	0.35	-0.5
48,728	-		GFF48	0.44	+0.9
48,766	+		GFF48	0.47	-0.5
48,766	+		GFF48	0.47	-0.8
48,767	-		GFF48	0.47	-0.2
48,889	+		GFF48	0.58	+0.7
49,213	+		GFF48	0.85	-1.5
49,402	+				-0.8
49,634	-		GFF49	0.15	+0.0
49,682	-		GFF49	0.18	+0.0
49,744	+		GFF49	0.21	+1.4
49,784	-		GFF49	0.24	-1.3
49,784	-		GFF49	0.24	+1.4
49,931	-		GFF49	0.33	-0.2
49,990	+		GFF49	0.37	+0.7
49,994	-		GFF49	0.37	+0.7
50,074	+		GFF49	0.42	-0.1