Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF464
Experiment: Ying_sugar7 rep A; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ying_sugar7 rep A; time point 3 |
|---|---|---|---|---|---|
| remove | |||||
| 128,343 | - | GFF463 | 0.68 | +0.1 | |
| 128,550 | - | -0.5 | |||
| 128,761 | + | GFF464 | 0.16 | -0.3 | |
| 128,761 | + | GFF464 | 0.16 | +0.9 | |
| 128,761 | + | GFF464 | 0.16 | +0.8 | |
| 128,762 | - | GFF464 | 0.16 | +0.0 | |
| 128,914 | + | GFF464 | 0.39 | +0.7 | |
| 129,007 | - | GFF464 | 0.53 | +0.8 | |
| 129,290 | - | -1.2 | |||
| 129,290 | - | -0.2 | |||
| 130,230 | + | GFF465 | 0.58 | -1.0 | |
| 130,231 | - | GFF465 | 0.58 | -0.2 | |
| 130,231 | - | GFF465 | 0.58 | -0.2 |
Or see this region's nucleotide sequence