Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4547

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
1,477,848	+		GFF4546	0.86	-0.1
1,477,848	+		GFF4546	0.86	+0.6
1,477,849	-		GFF4546	0.86	-0.7
1,477,849	-		GFF4546	0.86	-2.1
1,477,849	-		GFF4546	0.86	+0.3
1,477,849	-		GFF4546	0.86	-0.8
1,478,150	+				-0.4
1,478,150	+				-1.1
1,478,366	+				+1.2
1,478,550	+				-0.2
1,478,550	+				-0.1
1,478,550	+				-2.1
1,478,550	+				-0.9
1,478,551	-				+0.1
1,478,551	-				+0.5
1,478,616	+		GFF4547	0.35	+0.4
1,478,616	+		GFF4547	0.35	-0.5
1,478,617	-		GFF4547	0.36	-0.3
1,478,641	-		GFF4547	0.45	-0.7
1,478,837	+				-0.4
1,479,260	+		GFF4548	0.19	-0.2
1,479,261	-		GFF4548	0.19	-0.3
1,479,269	+		GFF4548	0.19	+1.0
1,479,386	-		GFF4548	0.25	-0.1
1,479,710	+		GFF4548	0.42	-2.1