Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4374

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
1,303,464	+				+0.1
1,303,526	+				-0.1
1,303,706	+		GFF4373	0.19	+0.2
1,303,867	-		GFF4373	0.37	-0.4
1,303,875	-		GFF4373	0.38	-0.1
1,303,875	-		GFF4373	0.38	+0.6
1,303,886	-		GFF4373	0.39	-0.2
1,304,100	-		GFF4373	0.63	+0.3
1,304,178	+		GFF4373	0.72	+0.1
1,304,292	-		GFF4373	0.85	-1.3
1,304,381	+				-0.4
1,304,381	+				-1.3
1,304,390	+				-1.7
1,304,391	-				-0.1
1,304,506	+		GFF4374	0.10	+1.0
1,304,506	+		GFF4374	0.10	+0.5
1,304,507	-		GFF4374	0.10	+1.3
1,304,520	-		GFF4374	0.12	-0.1
1,304,707	+		GFF4374	0.34	+0.1
1,304,707	+		GFF4374	0.34	-0.1
1,304,765	-		GFF4374	0.41	-0.1
1,304,771	-		GFF4374	0.42	+1.3
1,304,771	-		GFF4374	0.42	+0.5
1,305,058	+		GFF4374	0.76	-0.1
1,305,058	+		GFF4374	0.76	-0.5
1,305,059	-		GFF4374	0.76	-0.6
1,305,059	-		GFF4374	0.76	+0.5
1,305,180	-				+0.1
1,305,220	+				-0.1
1,305,221	-				-0.2
1,305,221	-				+1.7
1,305,448	-		GFF4375	0.23	+1.5
1,305,448	-		GFF4375	0.23	+0.3
1,305,564	+		GFF4375	0.38	-0.1
1,305,564	+		GFF4375	0.38	+0.7
1,305,627	-		GFF4375	0.47	+0.9
1,305,742	-		GFF4375	0.61	+0.6
1,305,837	+		GFF4375	0.74	+0.2
1,305,837	+		GFF4375	0.74	+0.7
1,305,838	-		GFF4375	0.74	-0.2
1,306,023	+				+0.7
1,306,082	+				+0.6
1,306,082	+				-0.2