Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4351

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
1,281,022	+		GFF4349	0.49	+0.7
1,281,022	+		GFF4349	0.49	-0.0
1,281,023	-		GFF4349	0.49	+0.1
1,281,611	+		GFF4350	0.29	-0.1
1,281,611	+		GFF4350	0.29	+0.0
1,281,611	+		GFF4350	0.29	+0.1
1,281,611	+		GFF4350	0.29	+0.0
1,281,611	+		GFF4350	0.29	+0.2
1,281,611	+		GFF4350	0.29	-0.2
1,281,612	-		GFF4350	0.29	+0.0
1,281,612	-		GFF4350	0.29	+0.2
1,281,612	-		GFF4350	0.29	+0.3
1,281,612	-		GFF4350	0.29	-0.6
1,281,612	-		GFF4350	0.29	+0.6
1,281,612	-		GFF4350	0.29	+0.3
1,281,945	-				+1.1
1,282,089	+		GFF4351	0.20	+0.7
1,282,089	+		GFF4351	0.20	+0.0
1,282,089	+		GFF4351	0.20	-0.3
1,282,089	+		GFF4351	0.20	-1.3
1,282,089	+		GFF4351	0.20	-0.0
1,282,089	+		GFF4351	0.20	-0.4
1,282,089	+		GFF4351	0.20	-1.0
1,282,090	-		GFF4351	0.20	-0.9
1,282,090	-		GFF4351	0.20	+0.2
1,282,090	-		GFF4351	0.20	-0.0
1,282,092	+		GFF4351	0.21	+0.4
1,282,092	+		GFF4351	0.21	+0.5
1,282,092	+		GFF4351	0.21	-1.3
1,282,093	-		GFF4351	0.21	-0.2
1,282,093	-		GFF4351	0.21	-0.9
1,282,093	-		GFF4351	0.21	-1.6
1,282,093	-		GFF4351	0.21	-0.2
1,282,152	+		GFF4351	0.37	+0.3
1,282,152	+		GFF4351	0.37	-0.1
1,282,152	+		GFF4351	0.37	-0.6
1,282,152	+		GFF4351	0.37	-0.0
1,282,263	+		GFF4351	0.66	-0.2
1,282,263	+		GFF4351	0.66	-1.0
1,282,263	+		GFF4351	0.66	+0.7
1,282,263	+		GFF4351	0.66	-0.4
1,282,263	+		GFF4351	0.66	+0.7
1,282,264	-		GFF4351	0.66	+0.1
1,282,459	-				+1.5
1,282,459	-				+0.5
1,282,640	+		GFF4352	0.32	-0.3
1,283,008	+				+0.0
1,283,008	+				+0.3
1,283,008	+				+0.7
1,283,008	+				+0.7
1,283,008	+				-0.7
1,283,008	+				-0.4
1,283,008	+				-0.4
1,283,009	-				-1.0
1,283,009	-				-0.1
1,283,009	-				+0.1
1,283,009	-				+0.4
1,283,009	-				-0.1
1,283,009	-				-0.0
1,283,026	-				+0.1
1,283,026	-				-0.7
1,283,026	-				-0.1
1,283,356	+		GFF4353	0.74	+0.3
1,283,356	+		GFF4353	0.74	+0.8
1,283,356	+		GFF4353	0.74	-0.3
1,283,356	+		GFF4353	0.74	+0.3
1,283,356	+		GFF4353	0.74	+0.7
1,283,356	+		GFF4353	0.74	+0.3
1,283,357	-		GFF4353	0.74	+0.3
1,283,357	-		GFF4353	0.74	-0.7
1,283,357	-		GFF4353	0.74	-0.3
1,283,357	-		GFF4353	0.74	+0.1
1,283,357	-		GFF4353	0.74	+0.1