Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3687

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
575,247	+		GFF3686	0.29	-2.6
575,247	+		GFF3686	0.29	-0.2
575,248	-		GFF3686	0.29	-1.9
575,319	+		GFF3686	0.34	-1.2
575,347	-		GFF3686	0.36	-1.6
575,677	-		GFF3686	0.60	-1.1
575,677	-		GFF3686	0.60	-0.8
575,712	+		GFF3686	0.62	-0.8
576,225	+				+0.7
576,225	+				+0.3
576,327	-				-1.2
576,867	-		GFF3687	0.29	-1.8
577,127	+		GFF3687	0.41	-2.0
577,128	-		GFF3687	0.42	-2.0
578,387	-				-0.6
578,834	-		GFF3688	0.43	-0.8
578,878	+		GFF3688	0.47	-1.0
579,040	+		GFF3688	0.62	-1.6
579,041	-		GFF3688	0.62	-0.4
579,340	+				-1.8